DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk3b

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_700001.2 Gene:kcnk3b / 571330 ZFINID:ZDB-GENE-120709-43 Length:383 Species:Danio rerio


Alignment Length:423 Identity:91/423 - (21%)
Similarity:146/423 - (34%) Gaps:169/423 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDR 154
            |...:....:::..|.|..:|:.||..||.:.|                :::....:.|.     
Zfish     2 KRQNVRTLALIICTLSYLLIGAGVFDALESKQE----------------KSQKGRLDYRK----- 45

  Fly   155 LWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSL 219
                   ..:::|.|.|||...:::       :.|...|.: ..|:|       |.::.:|.:::
Zfish    46 -------FLLMHKYNLTRLDFDQIE-------KVVLLLKPH-KAGVQ-------WKFSGSFYFAI 88

  Fly   220 TLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGP 284
            |:|||||||..:|.|..|:...:.|||.|||:.|:...::||.::..:|.|              
Zfish    89 TVITTIGYGHAAPSTDAGKAFCMGYALLGIPLTLVMFQSLGERINTFVRFL-------------- 139

  Fly   285 GGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQ 349
                                              ||                             
Zfish   140 ----------------------------------LH----------------------------- 141

  Fly   350 QAQQQQVQQGKKSSGNRRGSPS----VPISICVCV-LLCYVSSGAILFHKLQNWSVLESLYFCFT 409
                    :.||..|.||...|    |.|....|| .||.   ||..|...:.|:...:.|:||.
Zfish   142 --------KAKKCMGLRRPEVSMANMVIIGFFSCVSTLCI---GAAAFSHYEGWTFFHAFYYCFI 195

  Fly   410 SLGTIGFGEMAPNGAVALYTASA-------------YILVGMAVVAMCFSLIQTEIVLWLRRFSV 461
            :|.|||||:.     |||...:|             |||:|:.|:....:|    :||.....:.
Zfish   196 TLTTIGFGDY-----VALQKDNALQNDPHYVAFSFVYILMGLTVIGAFLNL----VVLRFMTMNT 251

  Fly   462 QDHVMPKAEELALVTV----------AVTPKPS 484
            :|. ...||:.||::.          |..|.||
Zfish   252 EDE-RRDAEQRALLSKDKHQGPVLRRAEPPSPS 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 22/55 (40%)
Ion_trans_2 380..453 CDD:462301 26/86 (30%)
kcnk3bXP_700001.2 Ion_trans_2 <73..132 CDD:462301 24/65 (37%)
Ion_trans_2 167..243 CDD:462301 27/87 (31%)

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