DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk3b

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_700001.2 Gene:kcnk3b / 571330 ZFINID:ZDB-GENE-120709-43 Length:383 Species:Danio rerio


Alignment Length:423 Identity:91/423 - (21%)
Similarity:146/423 - (34%) Gaps:169/423 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDR 154
            |...:....:::..|.|..:|:.||..||.:.|                :::....:.|.     
Zfish     2 KRQNVRTLALIICTLSYLLIGAGVFDALESKQE----------------KSQKGRLDYRK----- 45

  Fly   155 LWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSL 219
                   ..:::|.|.|||...:::       :.|...|.: ..|:|       |.::.:|.:::
Zfish    46 -------FLLMHKYNLTRLDFDQIE-------KVVLLLKPH-KAGVQ-------WKFSGSFYFAI 88

  Fly   220 TLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGP 284
            |:|||||||..:|.|..|:...:.|||.|||:.|:...::||.::..:|.|              
Zfish    89 TVITTIGYGHAAPSTDAGKAFCMGYALLGIPLTLVMFQSLGERINTFVRFL-------------- 139

  Fly   285 GGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQ 349
                                              ||                             
Zfish   140 ----------------------------------LH----------------------------- 141

  Fly   350 QAQQQQVQQGKKSSGNRRGSPS----VPISICVCV-LLCYVSSGAILFHKLQNWSVLESLYFCFT 409
                    :.||..|.||...|    |.|....|| .||.   ||..|...:.|:...:.|:||.
Zfish   142 --------KAKKCMGLRRPEVSMANMVIIGFFSCVSTLCI---GAAAFSHYEGWTFFHAFYYCFI 195

  Fly   410 SLGTIGFGEMAPNGAVALYTASA-------------YILVGMAVVAMCFSLIQTEIVLWLRRFSV 461
            :|.|||||:.     |||...:|             |||:|:.|:....:|    :||.....:.
Zfish   196 TLTTIGFGDY-----VALQKDNALQNDPHYVAFSFVYILMGLTVIGAFLNL----VVLRFMTMNT 251

  Fly   462 QDHVMPKAEELALVTV----------AVTPKPS 484
            :|. ...||:.||::.          |..|.||
Zfish   252 EDE-RRDAEQRALLSKDKHQGPVLRRAEPPSPS 283

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 22/55 (40%)
Ion_trans_2 380..453 CDD:400301 26/86 (30%)
kcnk3bXP_700001.2 Ion_trans_2 <77..132 CDD:285168 23/61 (38%)
Ion_trans_2 167..247 CDD:285168 29/91 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590262
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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