DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and kcnk5a

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001032478.1 Gene:kcnk5a / 570159 ZFINID:ZDB-GENE-051113-112 Length:513 Species:Danio rerio


Alignment Length:420 Identity:86/420 - (20%)
Similarity:143/420 - (34%) Gaps:171/420 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GVLL--LVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITE 160
            |.||  .::.|.::|:.:|..:|                  .|..|:|   :|....|: .||.:
Zfish     5 GPLLTSAIIFYLSIGAAIFQVIE------------------EPNWEIA---VRKYRADK-ESILK 47

  Fly   161 DLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPT--HKWTYASAFLYSLTLIT 223
            ....|.|.:            .|.:|..|..:   ...||.:....  :.|.:.:|.:::.|:||
Zfish    48 QYPCLTKAD------------LDYILEVVSDA---AGQGITITGDKTFNNWNWPNAVIFAATVIT 97

  Fly   224 TIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGA 288
            |||||.|:|:|..|||..:.|.|||:|:...::|.:|:..                         
Zfish    98 TIGYGNIAPKTPSGRVFCIFYGLFGVPLCFTWISELGKFF------------------------- 137

  Fly   289 SGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQ 353
                        |||..       |.|.            |..::....::.|            
Zfish   138 ------------GGRAK-------HLGW------------YLTKKGVTLRKTQ------------ 159

  Fly   354 QQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKL---------QNWSVLESLYFCFT 409
                                 ..|..|.|.:    .:|.|.:         :.|:.:|.|||.|.
Zfish   160 ---------------------LTCTAVFLLW----GVLIHLVIPPFVFMTQEGWTYIEGLYFSFV 199

  Fly   410 SLGTIGFGEMA----PNG---AVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMP 467
            :|.|||||::.    ||.   .:..|....:|.:|:|.:::.|:        |..|..|:.|...
Zfish   200 TLTTIGFGDLVAGVDPNAEYPTLYRYFVEVWIYLGLAWLSLFFN--------WKVRMVVEAHKAL 256

  Fly   468 K---------AEELAL----VTVAVTPKPS 484
            |         .:||.|    .|:.:.|.|:
Zfish   257 KKHRKRRRLSLDELQLKESHKTLHLPPTPN 286

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 23/55 (42%)
Ion_trans_2 380..453 CDD:400301 23/88 (26%)
kcnk5aNP_001032478.1 Ion_trans_2 <81..137 CDD:285168 23/55 (42%)
Ion_trans_2 171..243 CDD:285168 20/71 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590259
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.840

Return to query results.
Submit another query.