DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and kcnk2b

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001032475.1 Gene:kcnk2b / 568565 ZFINID:ZDB-GENE-051120-69 Length:384 Species:Danio rerio


Alignment Length:385 Identity:89/385 - (23%)
Similarity:140/385 - (36%) Gaps:145/385 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLN 163
            |.|||:||..:|:.||..||                :||            .|:.:|..:.|.|.
Zfish     9 VFLLVVLYLILGATVFKELE----------------QPY------------ETLQKLNILMEKLE 45

  Fly   164 ILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHK--WTYASAFLYSLTLITTIG 226
            .|  |....:.:.:::.....::.|:| :.|.|.|    |:....  |..:::|.:|.|:|||||
Zfish    46 FL--EQHPCVNSSDLENLVKQVVSALR-AGVNPSG----NSSNQSSLWDLSNSFFFSGTVITTIG 103

  Fly   227 YGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGG 291
            :|.|||.|:.||:..::|||.|||:....|:.:|:.|                            
Zfish   104 FGNISPHTEVGRIFCIIYALLGIPLFGFLLAGVGDQL---------------------------- 140

  Fly   292 VGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQV 356
                  |:..|:...|.:|                                       ...:..|
Zfish   141 ------GTIFGKAIAKVEG---------------------------------------MIDKWNV 160

  Fly   357 QQGKKSSGNRRGSPSVPISICVCVL---LCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGE 418
            .|.|..          .||..:.:|   |.:|:..|::|..::.||.|||:||...:|.|||||:
Zfish   161 SQTKIR----------VISTLLFILFGCLLFVTLPAVIFKHIEGWSALESIYFVVITLTTIGFGD 215

  Fly   419 MAPNGAVALYTASA------------------YILVGMAVVAMCFSLIQTEIVLWLRRFS 460
            .....|...:...:                  :||||:|..|...|:|..    |.|..|
Zfish   216 FVAGEAERRHHEESSGGSQLEYLDYYKPLVWFWILVGLAYFAAVLSMIGD----WFRVIS 271

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/57 (42%)
Ion_trans_2 380..453 CDD:400301 27/93 (29%)
kcnk2bNP_001032475.1 Ion_trans_2 <86..140 CDD:285168 24/53 (45%)
Ion_trans_2 178..268 CDD:285168 27/93 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590254
Domainoid 1 1.000 69 1.000 Domainoid score I9562
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.940

Return to query results.
Submit another query.