DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk12l

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_021324748.1 Gene:kcnk12l / 564796 ZFINID:ZDB-GENE-091118-74 Length:470 Species:Danio rerio


Alignment Length:517 Identity:109/517 - (21%)
Similarity:171/517 - (33%) Gaps:175/517 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILY 166
            |:|||...|::||..||                  :|    :..:...|..::|.:.||      
Zfish    49 LILLYLLCGAVVFSALE------------------HP----SEVQAHQRWEEQLANFTE------ 85

  Fly   167 KENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGIS 231
             :|...|.:.:|.|         ||.:.....||:::....:|.::.||.:..|:|:|||:|..:
Zfish    86 -QNSVHLKSLQVLL---------RQYEEAFAAGIRVDKLRARWDFSGAFYFVGTVISTIGFGMTT 140

  Fly   232 PRTQWGRVAALVYALFGIPIVLLYLSAMGE----ALSAGMRCLFRRQRVKGGPGGGPGGGASGGV 292
            |.|..|::..:.|.|.|....:|:.:...|    .|:..||....||..:               
Zfish   141 PVTVAGKIFLIFYGLLGCAATILFFNLFLERIITMLAYIMRWCHERQLRR--------------- 190

  Fly   293 GSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQ 357
             ||.||.....:.|..:             |..||||.                           
Zfish   191 -SGVGGEEARSEDDSLE-------------GWKPSVYY--------------------------- 214

  Fly   358 QGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPN 422
                          |.:.:.:..||...|:.| |:..::.|...||.||||.:..|||||::..:
Zfish   215 --------------VMLILGIAALLIACSASA-LYSAMEGWDYFESFYFCFVAFSTIGFGDVVSS 264

  Fly   423 GAVALYTASAY-------ILVGMAVVAMCF---SLIQTEIVLWL-------------------RR 458
            .........||       ||:|:..:...|   |:|..:.:.|:                   ||
Zfish   265 QRENYKAQEAYRFGNCLFILMGVCCIYSLFNVISIIIKQTLNWILGKLDCSRTQCPCRGRPYRRR 329

  Fly   459 FSV-------------QDHVMP--KAEELALVTVAVTPKPSXQRPS-----------ADPSLGVG 497
            ...             .:|..|  .:.:.|....||.|.|:.:...           .|.....|
Zfish   330 GRACGCCCFPRIPNQRHNHHPPPGNSRQRAQKRNAVHPAPANEASGKRFTNASVETVCDSETDAG 394

  Fly   498 LGVG---LAGGALGQPQNNLGQHQTMFFGPAHTLTQYSSL----PRRSHLQAANNSGGGSAF 552
            ||..   |.|..|.....::..........|....|.|..    ||:||::....|||..||
Zfish   395 LGPDGGYLTGRRLSGEMISVNDFMANKVSLAILQKQLSETAHGNPRQSHVRQNGFSGGVGAF 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 17/59 (29%)
Ion_trans_2 380..453 CDD:400301 25/82 (30%)
kcnk12lXP_021324748.1 Ion_trans_2 105..173 CDD:311712 19/67 (28%)
Ion_trans_2 221..303 CDD:311712 25/82 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.910

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