DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk3a

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001025333.1 Gene:kcnk3a / 561866 ZFINID:ZDB-GENE-040724-171 Length:390 Species:Danio rerio


Alignment Length:432 Identity:93/432 - (21%)
Similarity:150/432 - (34%) Gaps:172/432 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTV--DRLWSITED 161
            :::....|..:|:.||..||.::                        ||..:.:  ||...:.:.
Zfish    11 LIICTFTYLLVGAAVFDALESKM------------------------EITQKKILDDRKRELMDK 51

  Fly   162 LNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIG 226
            .| |.|.|:            |.|.|.|.|.|.: ..|:|       |.:|.:|.:::|:|||||
Zfish    52 YN-LSKVNF------------DELERVVLQLKPH-KAGVQ-------WRFAGSFYFAITVITTIG 95

  Fly   227 YGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGG 291
            ||..:|.|..|:|..:.|||.|||:.|:...::||.::..::.|..|.                 
Zfish    96 YGHAAPSTDGGKVFCMFYALLGIPLTLVMFQSLGERINTFVKYLLHRL----------------- 143

  Fly   292 VGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQV 356
                                                                             
Zfish   144 ----------------------------------------------------------------- 143

  Fly   357 QQGKKSSGNRRGSPSVPISICVCVLLCY--VSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEM 419
               ||..|.|....|:...:|:.::.|.  :..||..|.:.::||...:.|:||.:|.|||||:.
Zfish   144 ---KKCLGLRHTEVSMANMVCIGLISCMSTLCVGAAAFSRYEDWSFFHAYYYCFITLTTIGFGDY 205

  Fly   420 APNGAVALYTASA-------------YILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEE 471
                 |||...:|             |||.|:.|:....:|    :||.....:.:|. ...||:
Zfish   206 -----VALQKDNALQTNPQYVAFSFMYILTGLTVIGAFLNL----VVLRFMTMNAEDE-RRDAEQ 260

  Fly   472 LALVT-----------VAVTPKPSXQRPSADPSLGVGLGVGL 502
            ..|::           ..::..||    |:....|.|.|.||
Zfish   261 RTLLSRNRQSGGAGTNHCISDPPS----SSTAGHGGGSGKGL 298

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/55 (44%)
Ion_trans_2 380..453 CDD:400301 25/87 (29%)
kcnk3aNP_001025333.1 Ion_trans_2 <77..132 CDD:285168 25/61 (41%)
Ion_trans_2 165..247 CDD:285168 27/90 (30%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590263
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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