DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk1b

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001277277.1 Gene:kcnk1b / 561206 ZFINID:ZDB-GENE-090312-78 Length:337 Species:Danio rerio


Alignment Length:441 Identity:94/441 - (21%)
Similarity:162/441 - (36%) Gaps:159/441 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    81 SLCG--CQKAPKSHCISATGVLLLVL---LYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRT 140
            ||.|  |.:..:|: .||...|.|||   ||...|::||.::|...||                 
Zfish     4 SLAGNSCVRLIQSN-KSAWYFLFLVLGYVLYLIFGAVVFSSVELPYED----------------- 50

  Fly   141 ELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQL--N 203
                 ::|.:        ..::..|:.:....|:.:.::.|   |.:|:..|..    |:.:  |
Zfish    51 -----DLRQQ--------LREIKRLFLQEHQCLSEERLERF---LSKALEASNY----GVSILNN 95

  Fly   204 A-PTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALS--A 265
            | .:..|.:.|:..::.|:::|.|||..:|.:..|:...::|::.|||..||:|:|:.:.:.  :
Zfish    96 ASASWNWDFTSSLFFASTVLSTTGYGHTAPLSDGGKAFCIIYSVIGIPFTLLFLTAVVQRIMVYS 160

  Fly   266 GMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQ 330
            ..|.:.                                          |.|.:   :||      
Zfish   161 TWRPIM------------------------------------------YVHTR---WGL------ 174

  Fly   331 QQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPI----SICVCVLLCYVSSGAIL 391
                                                 ..|.|.:    .:.|..:.|:....|.:
Zfish   175 -------------------------------------SKPLVALVHATLLAVVAVSCFFLIPAAI 202

  Fly   392 FHKL-QNWSVLESLYFCFTSLGTIGFGEMAPNGAV-----ALYT--ASAYILVG---MAVVAMCF 445
            |..| :||:.|||.||||.||.|||.|:..|..|.     .||.  .:.|:|:|   |.||...|
Zfish   203 FSALEENWNFLESFYFCFISLSTIGLGDYVPGEAFNQRFRELYKLGITVYLLLGLIAMLVVLETF 267

  Fly   446 ----SLIQTEIVLWLRRFSVQDHV-MPKAEELALVTVAVTPKPSXQRPSAD 491
                .|.|...:.:|::...||.: :.:.:.||..::   |..: ..|..|
Zfish   268 CELQQLKQLRKMFYLKKEKPQDRLAIMEHDHLAFSSM---PDATIHSPHED 315

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 17/55 (31%)
Ion_trans_2 380..453 CDD:400301 32/87 (37%)
kcnk1bNP_001277277.1 Ion_trans_2 <99..157 CDD:285168 17/57 (30%)
Ion_trans_2 192..267 CDD:285168 29/74 (39%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590248
Domainoid 1 1.000 62 1.000 Domainoid score I10296
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.740

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