DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk13b

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001020654.1 Gene:kcnk13b / 556073 ZFINID:ZDB-GENE-040724-105 Length:412 Species:Danio rerio


Alignment Length:424 Identity:90/424 - (21%)
Similarity:145/424 - (34%) Gaps:168/424 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GCQKAPKSHCISATG-----------VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPY 137
            ||       |.::.|           :.||:::|...|:.||..||                  .
Zfish     6 GC-------CCNSIGSFNEDNARFLMLALLIIIYLLCGAAVFSALE------------------Q 45

  Fly   138 PRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLF-------QDTLLRAVRQSKVY 195
            |:.:||                       ||.|    ||.::.|       ||.|...:|..:..
Zfish    46 PKEKLA-----------------------KERW----AQRIEQFTNKYNLSQDDLKNFLRNYEEA 83

  Fly   196 PPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMG 260
            ...||:::|...:|.:|.||.:..|:::|||:|..:|.|..|::..:.|.|.|....:|:.:...
Zfish    84 NVAGIRVDATRARWDFAGAFYFVGTVVSTIGFGMTTPVTIAGKIFLIFYGLIGCAATILFFNLFL 148

  Fly   261 EALSAGMR-----CLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLH 320
            |.:...:.     |..||:..|.||.......::         ....|:||.             
Zfish   149 ERVITVIAFVLKFCHERRESRKAGPTQNCRRPST---------DNRDRRTDS------------- 191

  Fly   321 QYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLL--- 382
            ..|..||||                                               ||.::|   
Zfish   192 LAGWKPSVY-----------------------------------------------CVMLILGVA 209

  Fly   383 -----CYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASA--------YI 434
                 |..|:   ::...:.|..|::|||||.:..|||||:|..|.. .:|.|..        :|
Zfish   210 AILVSCCASA---MYSAAEGWDYLDALYFCFVAFSTIGFGDMVSNQR-EIYEAQVAYRVGNFLFI 270

  Fly   435 LVGMAVVAMCF---SLIQTEIVLW-LRRFSVQDH 464
            |.|:..:...|   |::..:::.| |||.....|
Zfish   271 LTGVCCIYSLFNVISIVIKQVLNWLLRRLETPCH 304

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 17/55 (31%)
Ion_trans_2 380..453 CDD:400301 24/91 (26%)
kcnk13bNP_001020654.1 Ion_trans_2 <94..152 CDD:285168 17/57 (30%)
Ion_trans_2 208..290 CDD:285168 23/85 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590228
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4404
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.740

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