DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and CG10864

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_650726.1 Gene:CG10864 / 42222 FlyBaseID:FBgn0038621 Length:389 Species:Drosophila melanogaster


Alignment Length:475 Identity:112/475 - (23%)
Similarity:176/475 - (37%) Gaps:135/475 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    51 RQTSTGGSSSGGGGSKSEKQAAREAGGGGGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFV 115
            |:.|.||:...|||..|...............| |:......| :..||..|:::|...|:..|:
  Fly     7 RKPSPGGTVGMGGGPSSVSSTPSNQPRKRVKRC-CRNFVTFMC-TQVGVGALIVIYAICGAFAFM 69

  Fly   116 TLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQL 180
            .:|.:..|    |||...           .|:|.....:||||||..||:.:..||......::.
  Fly    70 HIERQFVD----ETAGHV-----------MELRQNCSQQLWSITEQHNIIDRRRWTEATNDVLRE 119

  Fly   181 FQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYA 245
            :|..:...|:.       |....:|...|::.:|.::.|::||.||||.:.|||.||:...::||
  Fly   120 YQSQIAGVVKH-------GYVGRSPEQIWSFPAALMFCLSVITMIGYGNMVPRTPWGKGFTVIYA 177

  Fly   246 LFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKG 310
            .||||:.:||...||..|:...:.|:|                                      
  Fly   178 TFGIPLYILYFLNMGRVLARSFKFLYR-------------------------------------- 204

  Fly   311 QGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPIS 375
                   .||..                      .|:..:..:....:|  ..|..|....||.:
  Fly   205 -------SLHDC----------------------TQEHPRLDRMDALEG--GVGMTRKKVIVPST 238

  Fly   376 ICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASA-------- 432
            .|:.|:..||.:|.::|...:.||:|.|.|||.|||..||||:..|..::   |.||        
  Fly   239 ACLWVIFFYVLTGTVMFANWEKWSLLNSFYFCMTSLCKIGFGDFVPGASL---TTSADVNAATQK 300

  Fly   433 -------------------------------YILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVM 466
                                           |:|:||.:||||.:|::.|:.|..|.......:.
  Fly   301 LQEDISADPAELAQLQSVAADQHSKLAINFVYMLLGMGLVAMCRNLMREEVRLKAREMREDAKLC 365

  Fly   467 PKAEELALVTVAVTPKPSXQ 486
            .:...|..|.....|:.: :
  Fly   366 MEDTRLRFVGCCGNPRDAYE 385

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/55 (44%)
Ion_trans_2 380..453 CDD:400301 33/111 (30%)
CG10864NP_650726.1 Ion_trans_2 124..197 CDD:285168 28/79 (35%)
Ion_trans_2 242..>284 CDD:285168 19/41 (46%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C45441196
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - P PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
54.850

Return to query results.
Submit another query.