Protein Alignment CG42340 and sand

DIOPT Version :10

• Sequence 1: NP_001368973.1
• Gene: CG42340 / 7354472
• FlyBaseID: FBgn0259242
• Length: 759
• Species: Drosophila melanogaster
• Sequence 2: NP_610349.1
• Gene: sand / 35777
• FlyBaseID: FBgn0033257
• Length: 395
• Species: Drosophila melanogaster
• Alignment Length: 409
• Identity: 104/409 - (25%)
• Similarity: 185/409 - (45%)
• Gaps: 97/409 - (23%)

  Fly    90 KSHC-------ISATGVLLLVLLYTAMGSIVFVTLE-GELEDGGALETAVAASKPYPRTELANAE 146
            |.||       .|..|::|||..|...|:.:|.::| .|.|       .:.:.||:   ......
  Fly    20 KDHCRHFTAFMFSNVGIILLVTFYIIGGAFIFQSIEIFEYE-------RLKSEKPH---RFIARN 74

  Fly   147 IRSRTVDRLWSITEDLNILYKENWTRLAAQEVQL-FQDTLLRAVRQSKVYPPGGIQLNAP-THKW 209
            .....:.|:|.:|.:....:..:..|....:|.| :|..:::.            ||..| ..:|
  Fly    75 FSGECLSRIWELTAENISFFDHHAYRRRVNDVLLDYQRAIVKK------------QLKGPDVEQW 127

  Fly   210 TYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMR------ 268
            :::.|||||||:|||||||.|:|.::.|::..::||:.|:|:.|||||.:|:.|:...:
  Fly   128 SFSGAFLYSLTVITTIGYGNITPHSECGKLVTILYAIIGMPLFLLYLSNIGDVLAKSFKWIYSKV 192

  Fly   269 CLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQ 333
            ||.|               ...||..        |:..:.:       :|:.|......::..:.
  Fly   193 CLCR---------------ICPGVAK--------RRIIRER-------RKMRQLARALQMHDMEN 227

  Fly   334 AQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNR----------------RGSP---SVPISICVC 379
            |:.:.......:..:..:...:..:..:.|.:.                |||.   :||:::||.
  Fly   228 ARGSSSYTSTSSTTSSNSSSSEYTRSSRQSSSLVDIQYTESDSDIEREIRGSTDEITVPVTVCVF 292

  Fly   380 VLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNG----------AVALYTASAYI 434
            |::.|:..||:||.:.::|:.|:..|||..||.:||||::.|..          .|:....:.|:
  Fly   293 VMVGYILWGALLFGRWEDWNYLDGSYFCLISLSSIGFGDLVPGDRVITADRDKVEVSFILCAIYL 357

  Fly   435 LVGMAVVAMCFSLIQTEIV 453
            |:||||:||||:|:|.::|
  Fly   358 LLGMAVIAMCFNLMQEQVV 376

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42340	NP_001368973.1	Ion_trans_2	<208..264	CDD:462301	28/55 (51%)
		Ion_trans_2	380..453	CDD:462301	31/82 (38%)
sand	NP_610349.1	Ion_trans_2	<127..183	CDD:462301	29/55 (53%)
		Ion_trans_2	292..376	CDD:462301	31/83 (37%)