DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-48

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001022681.1 Gene:twk-48 / 3565640 WormBaseID:WBGene00010784 Length:372 Species:Caenorhabditis elegans


Alignment Length:389 Identity:107/389 - (27%)
Similarity:179/389 - (46%) Gaps:92/389 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 SATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSIT 159
            |..|:..||:.|..:|:::|..:||..|  ..::..|.::             |.:.||.:|:.|
 Worm    26 SHIGLCALVVGYALLGAVIFKAVEGPHE--AEIQELVKSA-------------REKAVDVVWNAT 75

  Fly   160 EDLNILYKENWTRLAAQEVQLFQDTLLRAVRQ---SKVYPPGGIQLNAPTHKWTYASAFLYSLTL 221
            ..:|.|..:.|.:....||:.|:...:.::|:   .|.|   |.|.     :||:..|||||||:
 Worm    76 FRVNRLDSKQWKKTVLDEVKRFKTVCMLSIRKGYDGKEY---GKQA-----QWTFTGAFLYSLTV 132

  Fly   222 ITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLF--------------- 271
            |||||||..:.:|..|:...::||:.|||::||:|:.:|:.::...|.|:               
 Worm   133 ITTIGYGNTAAKTYIGKTLTMLYAIIGIPLMLLFLTNIGDVMAKIFRFLYAQSIRLKFRLILWHK 197

  Fly   272 RRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQ-----KLHQYGLPPSVYQQ 331
            :|:..|                        .|:.:....:...||:     .:..:||......:
 Worm   198 KRKAAK------------------------IRRANSLVSRLTRGHRVKADSSVDSFGLGAGADVE 238

  Fly   332 QQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQ 396
            .......:.:|.:.::...||.:              |.:||||:.|..:|.|:..|..:|...:
 Worm   239 DLLTARVEMEQLEVRETAAAQLE--------------SMTVPISLVVFTMLGYLGVGTTIFKVWE 289

  Fly   397 NWSVLESLYFCFTSLGTIGFGEMAPNGAVA--------LYTASAYILVGMAVVAMCFSLIQTEI 452
            .|:.|||.||||.||.|||||:..|:.:|:        |...|.|:|.|||::||||:|.|.|:
 Worm   290 GWTFLESFYFCFISLTTIGFGDKFPSTSVSNTDEAQEKLVITSIYLLFGMALLAMCFNLAQEEV 353

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 27/55 (49%)
Ion_trans_2 380..453 CDD:400301 35/81 (43%)
twk-48NP_001022681.1 Ion_trans_2 <117..176 CDD:285168 28/63 (44%)
Ion_trans_2 272..355 CDD:285168 35/82 (43%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.920

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