DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and twk-43

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_872137.2 Gene:twk-43 / 3565024 WormBaseID:WBGene00006693 Length:597 Species:Caenorhabditis elegans


Alignment Length:563 Identity:103/563 - (18%)
Similarity:206/563 - (36%) Gaps:146/563 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KSHCISATGVLLLVLLYTAMGSIVFVTLEG---ELEDGGAL-----------------ETAVAAS 134
            |.:.::| |::|.|.:|...|:::...:|.   ::|:...|                 |..:.|.
 Worm    36 KPYLLNA-GIVLFVGIYVYAGALLIQYIERIPVKVEESFRLRRNSQDDMPIIPLDRSKECVLQAL 99

  Fly   135 KPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDT--------LLRAVRQ 191
            :...:....|..          .:..::|:|  ||......|:::...|:        ...||..
 Worm   100 RKMSQISKGNCS----------QLHNNVNLL--ENCYASDLQKLKTIYDSSEGSKAPEQQSAVAL 152

  Fly   192 SKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYL 256
            .|.....|.:      :||...|.|:..|:|||||||.::|::.||||..::|...|||..::.:
 Worm   153 KKFVIVDGFE------QWTTTDAILFCFTVITTIGYGNVAPQSFWGRVFVIIYGTIGIPTAMMAI 211

  Fly   257 SAMGEALSAGMR---------CLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQG 312
            :.:|:.|:..::         |...::|:                          :|.|:| |..
 Worm   212 ANVGKFLATLLKSWTRPFLLLCRKMKKRM--------------------------QKKDQN-GNE 249

  Fly   313 HYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISIC 377
            ....|:|          .:...::|::.:...:....:..:::|::          |......:.
 Worm   250 IKETQRL----------MESSKKKAKKIEDDISSHEDEEAEEEVEE----------SDVTETIVL 294

  Fly   378 VCVLLCYVSSGAILFHKLQNWSVLE-SLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVV 441
            ....|.|:.:|::|....:...... ::||.|.:|.|||.|::.|.....|:....|..:|:|:.
 Worm   295 FVAFLVYIIAGSLLMSYYEEGMTFGLAIYFNFVTLTTIGLGDLVPQSTDWLFVTLVYCAIGLALT 359

  Fly   442 AMCFSL-----------------IQTEIVLWL--RRFSVQDHVMPKAEELALVTVAVTPKPSXQR 487
            .:...:                 :| .:.:|.  ::.|::..|....::|.:        |..:.
 Worm   360 TIAIEIAADTLKKLHYFGRKLDNVQ-NVQIWFGGQKLSMKALVKNLGDQLNV--------PVEEL 415

  Fly   488 PSADPSLGVGLGVGLAGGALGQPQN-----NLGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSG 547
            .:.|.:..|...:.:..|.|...:|     |....:.:..|..|.:.....:..:|:|     |.
 Worm   416 ENLDLAKFVDDAIKVEAGELTTLRNDRAWMNSNYWRAIESGSMHYVDDDDLVTLQSNL-----SC 475

  Fly   548 GGSAFQRNTPIRRSTG---IPEHHLEYFVPRSISEFNLSGVGD 587
            |........|..|||.   |..:| |.....|...|.|..|.:
 Worm   476 GSQQMLIRVPYSRSTDSRMITVNH-EPLTETSDENFKLHSVNE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 22/55 (40%)
Ion_trans_2 380..453 CDD:462301 18/90 (20%)
twk-43NP_872137.2 Ion_trans_2 155..218 CDD:462301 23/68 (34%)
Ion_trans_2 298..372 CDD:462301 17/73 (23%)

Return to query results.
Submit another query.