DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-43

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_872137.2 Gene:twk-43 / 3565024 WormBaseID:WBGene00006693 Length:597 Species:Caenorhabditis elegans


Alignment Length:563 Identity:103/563 - (18%)
Similarity:206/563 - (36%) Gaps:146/563 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    90 KSHCISATGVLLLVLLYTAMGSIVFVTLEG---ELEDGGAL-----------------ETAVAAS 134
            |.:.::| |::|.|.:|...|:::...:|.   ::|:...|                 |..:.|.
 Worm    36 KPYLLNA-GIVLFVGIYVYAGALLIQYIERIPVKVEESFRLRRNSQDDMPIIPLDRSKECVLQAL 99

  Fly   135 KPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDT--------LLRAVRQ 191
            :...:....|..          .:..::|:|  ||......|:::...|:        ...||..
 Worm   100 RKMSQISKGNCS----------QLHNNVNLL--ENCYASDLQKLKTIYDSSEGSKAPEQQSAVAL 152

  Fly   192 SKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYL 256
            .|.....|.:      :||...|.|:..|:|||||||.::|::.||||..::|...|||..::.:
 Worm   153 KKFVIVDGFE------QWTTTDAILFCFTVITTIGYGNVAPQSFWGRVFVIIYGTIGIPTAMMAI 211

  Fly   257 SAMGEALSAGMR---------CLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQG 312
            :.:|:.|:..::         |...::|:                          :|.|:| |..
 Worm   212 ANVGKFLATLLKSWTRPFLLLCRKMKKRM--------------------------QKKDQN-GNE 249

  Fly   313 HYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISIC 377
            ....|:|          .:...::|::.:...:....:..:::|::          |......:.
 Worm   250 IKETQRL----------MESSKKKAKKIEDDISSHEDEEAEEEVEE----------SDVTETIVL 294

  Fly   378 VCVLLCYVSSGAILFHKLQNWSVLE-SLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVV 441
            ....|.|:.:|::|....:...... ::||.|.:|.|||.|::.|.....|:....|..:|:|:.
 Worm   295 FVAFLVYIIAGSLLMSYYEEGMTFGLAIYFNFVTLTTIGLGDLVPQSTDWLFVTLVYCAIGLALT 359

  Fly   442 AMCFSL-----------------IQTEIVLWL--RRFSVQDHVMPKAEELALVTVAVTPKPSXQR 487
            .:...:                 :| .:.:|.  ::.|::..|....::|.:        |..:.
 Worm   360 TIAIEIAADTLKKLHYFGRKLDNVQ-NVQIWFGGQKLSMKALVKNLGDQLNV--------PVEEL 415

  Fly   488 PSADPSLGVGLGVGLAGGALGQPQN-----NLGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSG 547
            .:.|.:..|...:.:..|.|...:|     |....:.:..|..|.:.....:..:|:|     |.
 Worm   416 ENLDLAKFVDDAIKVEAGELTTLRNDRAWMNSNYWRAIESGSMHYVDDDDLVTLQSNL-----SC 475

  Fly   548 GGSAFQRNTPIRRSTG---IPEHHLEYFVPRSISEFNLSGVGD 587
            |........|..|||.   |..:| |.....|...|.|..|.:
 Worm   476 GSQQMLIRVPYSRSTDSRMITVNH-EPLTETSDENFKLHSVNE 517

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 22/55 (40%)
Ion_trans_2 380..453 CDD:400301 18/90 (20%)
twk-43NP_872137.2 Ion_trans_2 <162..218 CDD:285168 22/61 (36%)
Ion_trans_2 298..372 CDD:285168 17/73 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
33.010

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