DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and Kcnk18

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_997144.1 Gene:Kcnk18 / 332396 MGIID:2685627 Length:394 Species:Mus musculus


Alignment Length:429 Identity:93/429 - (21%)
Similarity:168/429 - (39%) Gaps:126/429 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    80 GSLCGCQKAPKSHCISATGVLL-------LVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPY 137
            |...||       |..|.|.||       .::.|..:|:.:|..:||               :|.
Mouse    18 GKARGC-------CPEALGKLLPGLCFLCCLVTYALVGAALFSAVEG---------------RPD 60

  Fly   138 PRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQL 202
            |..| .|.|:: :.:|.|.:|.: .|:...|...:...:.:|..:...|:|.:.           
Mouse    61 PEAE-ENPELK-KFLDDLCNILK-CNLTVVEGSRKNLCEHLQHLKPQWLKAPQD----------- 111

  Fly   203 NAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSA-- 265
                  |::.||..:..|:.:|:|||.:.|.|:.|:...::|||||||::.|.|:.:|:.|:.  
Mouse   112 ------WSFLSALFFCCTVFSTVGYGHMYPVTRLGKFLCMLYALFGIPLMFLVLTDIGDILATIL 170

  Fly   266 --------GMRC------------LFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDK--- 307
                    .:.|            |.|:|     |...|...|...:...||       .|:   
Mouse   171 SRAYSRFQALLCLPHDIFKWRSLPLCRKQ-----PDSKPVEEAIPQIVIDAG-------VDELLN 223

  Fly   308 ---NKGQGHYGHQKLHQYGLPPS------VYQQQQAQQAQQAQQQQAQQAQQAQQ-QQVQQGKKS 362
               :|.              |||      ::::..|::.:...|...:..:::.. .::..|:.|
Mouse   224 PQPSKD--------------PPSPSCNVELFERLVAREKKNKLQPPTRPVERSNSCPELVLGRLS 274

  Fly   363 S---------GNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSV----LESLYFCFTSLGTI 414
            .         |.:.....:|:.:...|:..|:|..|.:   |..|..    .::.||||.:|.||
Mouse   275 CSILSNLDEVGQQVERLDIPLPVIALVVFAYISCAAAI---LPFWETELGFEDAFYFCFVTLTTI 336

  Fly   415 GFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIV 453
            |||::...........|.||:|||.::.:.|.|:|..::
Mouse   337 GFGDIVLVHPHFFLFFSIYIIVGMEILFIAFKLMQNRLL 375

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 21/55 (38%)
Ion_trans_2 380..453 CDD:462301 25/76 (33%)
Kcnk18NP_997144.1 Ion_trans_2 105..166 CDD:462301 23/77 (30%)
Selectivity filter 1. /evidence=ECO:0000250|UniProtKB:P57789 127..132 3/4 (75%)
Interaction with calcineurin. /evidence=ECO:0000269|PubMed:16569637 210..215 0/4 (0%)
Interaction with YWHAH. /evidence=ECO:0000269|PubMed:18397886 261..266 0/4 (0%)
Ion_trans_2 297..374 CDD:462301 25/79 (32%)
Selectivity filter 2. /evidence=ECO:0000250|UniProtKB:Q7Z418 335..340 4/4 (100%)

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