DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-10

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001300134.1 Gene:twk-10 / 192080 WormBaseID:WBGene00006665 Length:429 Species:Caenorhabditis elegans


Alignment Length:515 Identity:100/515 - (19%)
Similarity:181/515 - (35%) Gaps:172/515 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYP-----------RTELANAEIRSRT 151
            |::||.:||...|::.|:..|...|.    .......|.|.           |.:|.:.....|.
 Worm    41 GLILLCILYVHFGALFFMYSESPEEQ----RILRRVEKRYDILRETFLENVNRVKLEDFSDERRV 101

  Fly   152 VDRLWSITEDLNILYKENWTRLAAQEV--QLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASA 214
            .:.:..:.:|    |.::..:|....|  .:| |.|..:  ||...|           .||..|:
 Worm   102 NESISRLIDD----YSKHMFKLFTNPVAANMF-DCLFYS--QSNYTP-----------LWTTDSS 148

  Fly   215 FLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGG 279
            .|::.|.|..:|||.|:|.|..||:...:||.||||:.|:.:|.:|:        .|....||  
 Worm   149 LLFTATTIIPVGYGYIAPLTSTGRIVLCIYAAFGIPLALVMMSDVGK--------FFADAFVK-- 203

  Fly   280 PGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQ 344
                                              :.|:.:..:                      
 Worm   204 ----------------------------------FFHENITAF---------------------- 212

  Fly   345 AQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFT 409
                                         :.:.:.:|:.|...|.|.:.|:....::|.:||...
 Worm   213 -----------------------------MVVLLILLVAYSVIGGIAYSKIVGVPMIEGVYFSTI 248

  Fly   410 SLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELAL 474
            ::.|||||::.|  .:.:|....:|:.|:|:|.:...::...|:..:.....|   :.:|:.:|.
 Worm   249 TIFTIGFGDITP--GIPVYVIIIFIVFGVAIVTIAIDVVAANIIHHIHYMGRQ---VGRAKIIAD 308

  Fly   475 VTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMFFGPAHTLTQYSSL-PRRS 538
            ..:::..|.|..|         |||:|:|         .||.     |.....:...|:: |:..
 Worm   309 KMLSMAQKISINR---------GLGLGMA---------QLGA-----FARMGMMINVSAMGPQDG 350

  Fly   539 HLQAANNSGGGSAFQRNT--------PIRRSTGI-PE---HHLEYFVPRSISEFNLSGVG 586
            |.......||....:::|        ..|:||.. |:   ..:::..|...|:: |.|.|
 Worm   351 HANGGVGEGGIEMSRKSTWRSENDEIKTRKSTAFEPDLDFDMIDFRQPSGSSQY-LYGFG 409

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 23/55 (42%)
Ion_trans_2 380..453 CDD:462301 19/72 (26%)
twk-10NP_001300134.1 Ion_trans_2 128..199 CDD:462301 30/92 (33%)
Ion_trans_2 218..286 CDD:462301 19/69 (28%)

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