DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-25

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_502170.4 Gene:twk-25 / 192076 WormBaseID:WBGene00006678 Length:683 Species:Caenorhabditis elegans


Alignment Length:557 Identity:106/557 - (19%)
Similarity:166/557 - (29%) Gaps:230/557 - (41%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDR-LWSI--TE 160
            :||||||||.:|:.:|.::|.                   |.|........|.:|| ::.|  |.
 Worm   292 MLLLVLLYTLLGAALFFSIES-------------------RHEHETMHFHKRKLDRIIYEIAQTL 337

  Fly   161 DLNILYKENWTRLAAQE-------VQLFQ-DTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLY 217
            :|.:|.....|.:...|       |:|.. :.|.......|...|..:       ||||.|||.:
 Worm   338 ELEVLDPMKLTNITQMEYFITRAYVKLLNAEDLYSGSTFYKHEDPKNL-------KWTYGSAFFF 395

  Fly   218 SLTLITTIGYGGISPRTQWGRVAALVYALFGIPI-----------VLLYLSAMGEALSAGMRCLF 271
            |:.:.||.|||.|:|.:..|:...:||.|..:|:           .||||:.|...|...    |
 Worm   396 SMNVYTTTGYGSIAPSSSLGKALVIVYGLIFVPLTAVVIRDLGQWALLYLTKMYTILIDS----F 456

  Fly   272 RRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQ 336
            ||.|                        |...|.|:::                           
 Worm   457 RRVR------------------------GFVDKLDEDE--------------------------- 470

  Fly   337 AQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNW--- 398
                                            ..::||...|.|::.|:.|..:...:....   
 Worm   471 --------------------------------IITLPIKFSVSVMILYLLSATMFIFEYDELSGP 503

  Fly   399 -----SVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRR 458
                 |...:.||.|.|:.|||.|::.||........:.....||.::         ::|..:..
 Worm   504 PDSGISFFHAFYFSFISMSTIGLGDVMPNNVTFSPLITIMFFFGMPIL---------KVVNRVTY 559

  Fly   459 FSVQDHVMPK----AEELALVTVAVTPKPSXQRPSADPSLGVG------LGVGLAGGALGQPQNN 513
            ..:::.|...    ...|..:....|..|:.|..|..|::.|.      |..|:.      |..|
 Worm   560 ICLENGVFGSMTVLENRLDTIWSKATVLPTGQVISEPPTIDVASRKTSMLSEGMI------PDEN 618

  Fly   514 LGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSGGGSAFQRNTPIRRSTGIPEHHLEYFVPRSIS 578
            .|                                               .:|..:|..|..|||:
 Worm   619 DG-----------------------------------------------SVPNEYLNNFTIRSIA 636

  Fly   579 EFNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNMG 615
            .| :...||:.              ||..|.:.:..|
 Worm   637 TF-MKANGDVY--------------GGAFGRVNIRRG 658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 25/66 (38%)
Ion_trans_2 380..453 CDD:400301 16/80 (20%)
twk-25NP_502170.4 Ion_trans_2 370..440 CDD:285168 23/76 (30%)
Ion_trans <482..555 CDD:278921 16/81 (20%)
Ion_trans_2 482..551 CDD:285168 16/68 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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