DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-1

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001293466.1 Gene:twk-1 / 192072 WormBaseID:WBGene00006656 Length:451 Species:Caenorhabditis elegans


Alignment Length:349 Identity:62/349 - (17%)
Similarity:127/349 - (36%) Gaps:107/349 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   120 ELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDT 184
            |.|..|.:|..:.:.|  .:.:|.:      .:||.:.:..|.....|....::..:|: :|..|
 Worm    14 EEEHAGLIENQIISQK--TKKQLPS------WLDRPYHVWRDQFQQDKCCPKKMVKREL-MFAST 69

  Fly   185 LLRAVRQSKV-YPPGGIQL-----NAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALV 243
            .:..:..:.: |...|.|:     ::..::.::....|:.:|.|:|||||.|:|....|:|..::
 Worm    70 YVLILNVALILYVLFGCQVFDLRHSSTNNEASFLDRALFCITTISTIGYGNIAPFDDRGKVICIL 134

  Fly   244 YALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKN 308
            |.:.|||:..:.: |....|...:..:..|.                                  
 Worm   135 YCVAGIPLFFMTV-ATNSVLVVDICNIVHRS---------------------------------- 164

  Fly   309 KGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVP 373
                                |..|..:                          :||.|..:.:: 
 Worm   165 --------------------YSSQNVE--------------------------NSGFRWYTSAI- 182

  Fly   374 ISICVCVLLCYVSSGAILFHK-LQNWSVLESLYFCFTSLGTIGFGEMA--PNGAVALYTASAYIL 435
                :....|::  ||::|.. :.....|::.||.|.|:.|||:|:.:  |.|.......:.|:.
 Worm   183 ----LLAAHCFI--GALIFSLWIDQLDFLDAFYFSFISITTIGYGDYSPTPEGLFQYIIVTVYLC 241

  Fly   436 VGMAVVAMCFSLIQTEIVLWLRRF 459
            .|:|.:.:.|:.:|..| :|:..:
 Worm   242 TGVATMLLFFASLQKGI-MWIHYY 264

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 17/55 (31%)
Ion_trans_2 380..453 CDD:400301 20/75 (27%)
twk-1NP_001293466.1 Ion_trans_2 76..156 CDD:285168 21/80 (26%)
Ion_trans_2 182..260 CDD:285168 21/85 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D774951at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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