DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-23

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001257229.1 Gene:twk-23 / 192071 WormBaseID:WBGene00006676 Length:443 Species:Caenorhabditis elegans


Alignment Length:395 Identity:82/395 - (20%)
Similarity:143/395 - (36%) Gaps:137/395 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    96 ATGVLLL---VLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWS 157
            |.|.|.|   |:.|...|:.||..||||.|                 |||.:.:       |.::
 Worm    42 ALGHLALYCFVVCYVFAGAWVFHQLEGENE-----------------TELHDKQ-------REYA 82

  Fly   158 ITEDLNILYKENWTRLAA---QEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH----KWTYASAF 215
            :....:::.|...|...|   :.:::|    ||.:....:.....:..|.||.    :||:.|:.
 Worm    83 MNLKKDVIAKLATTENVAEINEHLRMF----LRNISNLHISLDNYLIFNEPTQIVPKRWTFPSSV 143

  Fly   216 LYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGP 280
            |:|.|::||||||.::|.||..:|..::|..||||:.|:.::.:|......:..|          
 Worm   144 LFSFTILTTIGYGNVTPHTQQCKVFLMIYGAFGIPLFLITIADLGRFSKTAIMAL---------- 198

  Fly   281 GGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQA 345
                                                                             
 Worm   199 ----------------------------------------------------------------- 198

  Fly   346 QQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQN-WSVLESLYFCFT 409
              .|:..::::   ||.|..........:.:...:.:.:::.|:.:....:| .:..:|:||.:.
 Worm   199 --VQKVSKREL---KKQSDEHLLREIAEVLLVAGLFVVFIAIGSAVIPLWENQLTYFDSVYFSYM 258

  Fly   410 SLGTIGFGEMAPNGAVALYTASAYILVGM----AVV---AMCFSLIQ---------TEIVLWL-- 456
            ||.|||.|::.|.....|.....||.:|:    |:|   |..|.|:.         ..|.:||  
 Worm   259 SLTTIGLGDIVPRRMDFLLPTLIYITIGLWLTTALVEQLADVFRLVHYAGRQVTNVKGITVWLGG 323

  Fly   457 RRFSV 461
            ||.|:
 Worm   324 RRLSM 328

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 23/55 (42%)
Ion_trans_2 380..453 CDD:400301 21/89 (24%)
twk-23NP_001257229.1 Ion_trans_2 118..190 CDD:285168 26/71 (37%)
Ion_trans_2 228..302 CDD:285168 19/73 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
33.020

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