DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and twk-45

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001122742.2 Gene:twk-45 / 190614 WormBaseID:WBGene00006695 Length:508 Species:Caenorhabditis elegans


Alignment Length:555 Identity:118/555 - (21%)
Similarity:195/555 - (35%) Gaps:183/555 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HCISATGVLLLVLL--YTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDR 154
            |......:.|:.:|  |..:|..:|..||...|.....||          .:..|..|::.|:| 
 Worm    80 HKFGIRHITLISILAAYICLGGFLFQKLESPREIEELQET----------LKSMNEIIKNETMD- 133

  Fly   155 LWSIT-----EDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHK------ 208
            :..||     ||.|               |...| ||||..:..:...|....:| .||      
 Worm   134 IIKITLTTNGEDRN---------------QKLGD-LLRAYHRILLETEGKFHGSA-WHKSENLDM 181

  Fly   209 ---WTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCL 270
               |.::||..||:||.:|||||.|:.:|.||:..::|||..|:||:||.|..:|          
 Worm   182 NLMWYFSSATFYSMTLFSTIGYGTITCQTFWGKTVSMVYASIGLPIMLLVLGDIG---------- 236

  Fly   271 FRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQ 335
                                                                     |:.|:...
 Worm   237 ---------------------------------------------------------VWFQKVMT 244

  Fly   336 QAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYV---SSGAILFHKLQ- 396
            .|......:.:..:          |:|...:|....:|:.:.:.|:..|:   :...:||...: 
 Worm   245 NAYIFVMLKYKSLR----------KQSIEIKRKETLLPMWLAMLVVFTYIIICTLTILLFDDNEG 299

  Fly   397 ---NWSVLESLYFCFTSLGTIGFGEMAP-NGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLR 457
               ..:..::.||.|.||.|||.|::.| |...:.:...|::| |:|::    |::.|.|...|.
 Worm   300 DEPGINFFDAFYFTFISLTTIGLGDVMPYNIQYSPFLPLAFLL-GLALI----SIVNTSIYSTLY 359

  Fly   458 R------FSVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQ 516
            :      :|::|.:                    .|.......|       ||..:.|...:..|
 Worm   360 QSFYNLIYSLEDQL--------------------DRIHNSRRRG-------AGYRVFQDMESTFQ 397

  Fly   517 HQTMFF--GPAHTLTQYSSLPRRSHLQAANNSGGGSAFQRNTPIRRSTGIPEHHLEYFVPRSISE 579
            .....|  .|||:..:::||.|.|..:|...|.     |.....|..:.||:...::...||   
 Worm   398 MLVCTFPPSPAHSRIRFASLIRDSFREAKKESA-----QPKVRTRTESDIPDGFQQWMAKRS--- 454

  Fly   580 FNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNM 614
            ..|....|..  ..:|.:|.:    |.:||..|::
 Worm   455 RRLHSADDEM--KEKRRAPTL----GALGGFDMSL 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 27/64 (42%)
Ion_trans_2 380..453 CDD:400301 21/80 (26%)
twk-45NP_001122742.2 Ion_trans_2 <185..241 CDD:285168 27/122 (22%)
Ion_trans_2 278..354 CDD:285168 21/80 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163744
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.950

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