DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG42340 and kvs-4

DIOPT Version :9

Sequence 1:	NP_001368973.1	Gene:	CG42340 / 7354472	FlyBaseID:	FBgn0259242	Length:	759	Species:	Drosophila melanogaster
Sequence 2:	NP_001367099.1	Gene:	kvs-4 / 190011	WormBaseID:	WBGene00012967	Length:	539	Species:	Caenorhabditis elegans

Alignment Length:	142	Identity:	30/142 - (21%)
Similarity:	61/142 - (42%)	Gaps:	22/142 - (15%)

- Green bases have known domain annotations that are detailed below.

  Fly   359 GKKSSGNRRGSPSVPISI-CVCVLLCYVSSGAILFHKLQNW-----------SVLESLYFCFTSL 411
            |:.|||.:....::..|. .:.::...|.:|.|.|..|..:           |:..:.::|..::
Worm   400 GRYSSGLQMFGKTLKASFRQLGMMAMVVMTGVIFFSTLVYFLEKDEPASKFHSIPAACWWCIVTM 464

  Fly   412 GTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLI--------QTEIVLWLRRFSVQDHVMPK 468
            .|:|:|::.|........|:..|..|:.|:|:..::|        :||......|:....:  ||
Worm   465 TTVGYGDLTPVTVPGKLVATGAIACGVLVLALPITIIVDNFMKVAETERPAGGNRYRTSQY--PK 527

  Fly   469 AEELALVTVAVT 480
            |.:...:.:.||
Worm   528 ATKSEQMILKVT 539

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG42340	NP_001368973.1	Ion_trans_2	<208..264	CDD:400301
CG42340	NP_001368973.1	Ion_trans_2	380..453	CDD:400301	19/91 (21%)
kvs-4	NP_001367099.1	BTB_POZ_Kv	121..208	CDD:349626
kvs-4	NP_001367099.1	Ion_trans	265..513	CDD:395416	23/112 (21%)
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D774951at2759
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	1.010