DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-47

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001309491.1 Gene:twk-47 / 185227 WormBaseID:WBGene00018002 Length:500 Species:Caenorhabditis elegans


Alignment Length:383 Identity:77/383 - (20%)
Similarity:146/383 - (38%) Gaps:99/383 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDL 162
            |:.:.:.||..:|:..|...|.:            |.|....|:|.....|.:.::....:....
 Worm    30 GLAVFLFLYLLIGAYAFYYQEYD------------ADKKIQMTKLNLIRQRYKQIENEVKVFIGN 82

  Fly   163 NILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPG--------GIQLNAPTHKWTYASAFLYSL 219
            :..|:|            ::..||:.:.....|..|        ||..:|...:||..|:.||:|
 Worm    83 DKKYEE------------YKPKLLKHLSGLSTYHEGREFKSTISGISDDALPPRWTKRSSILYAL 135

  Fly   220 TLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRR-----QRVKGG 279
            :::||.||....|.|..|:..|::|.|.|||:::|.....|..||..:..|:.:     .::|  
 Worm   136 SILTTTGYAYAVPVTPIGQCFAIIYGLVGIPMMVLAAVDFGRFLSHIVLELYSKYLDLVHKLK-- 198

  Fly   280 PGGGPGGGASGGVGSGAGGSGGGRKT---DKNKGQGHYGHQKLHQY-------GLPPSVYQQQQA 334
                                  ..||   ::::.:..  .::||.:       |   |...:...
 Worm   199 ----------------------IMKTVILERHRARDE--KRRLHAFKRLVQDTG---STISECTT 236

  Fly   335 QQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWS 399
            |:..|.:::|...:.:..:::                :|:.|...:||.:...|.:|:......:
 Worm   237 QKDVQLEEEQTTDSDEMPEKR----------------LPLVINASILLIFCMLGGVLYIAAGGRA 285

  Fly   400 V-LESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILV----GMAVVAMCFSLIQTEI 452
            . :||.:..|..:..:...|| ||....:.|. .||.|    |:||::|...|...|:
 Worm   286 TFIESFFLTFNLVANLTMSEM-PNELNHILTI-IYIFVFVTCGVAVLSMSAELAALEL 341

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 21/55 (38%)
Ion_trans_2 380..453 CDD:462301 21/78 (27%)
twk-47NP_001309491.1 Ion_trans_2 <122..180 CDD:462301 21/57 (37%)

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