DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-35

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_508031.3 Gene:twk-35 / 185149 WormBaseID:WBGene00006687 Length:557 Species:Caenorhabditis elegans


Alignment Length:374 Identity:87/374 - (23%)
Similarity:151/374 - (40%) Gaps:118/374 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLV-LLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANA------EIRSRTVDRLW 156
            ||::| |:|...|.:||..:|                :|| ::||.:|      ..|:..||.:.
 Worm   145 VLIIVFLIYCISGGLVFWLIE----------------EPY-QSELRDAWQHKIENNRTARVDAMM 192

  Fly   157 S---ITEDLNILYKEN----WTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASA 214
            .   ...|..|..|.|    .|....:|:..:::.|             |::.:.....|.:.:|
 Worm   193 KKIFNNSDYLIYIKGNTSQRLTTFFIEELGSYENQL-------------GVKWSQQKMDWDFWNA 244

  Fly   215 FLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRC-LFRRQRVKG 278
            .|::.|:.||||||.|.|.|..||:..:::||||||::||.|...|:.|:..|:. .|:.:|:  
 Worm   245 VLFAGTICTTIGYGHIYPMTDAGRMLTMIFALFGIPLMLLVLQDFGKLLTITMKFPWFQTKRL-- 307

  Fly   279 GPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQ 343
                                                                             
 Worm   308 ----------------------------------------------------------------- 307

  Fly   344 QAQQAQQAQQQQVQQGKKSSGNRRGSPSV-----PISICVCVLLCYVSSGAILFHKLQNWSVLES 403
            ..:..:...:|.:::.|:.....|....:     |:.|.:.|...::.| .:|.....||::|||
 Worm   308 MRRIMRCCTKQPIEEMKEIERQERHDLDIFDLPLPVGIALIVTWIFICS-FVLSVWDHNWTLLES 371

  Fly   404 LYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEI 452
            .||.||||.|:|.|::.|:....|.|...:||||:::|:|..:|:|.::
 Worm   372 FYFFFTSLSTVGLGDLVPSSPRLLITMFGFILVGLSLVSMVINLLQAKM 420

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 25/55 (45%)
Ion_trans_2 380..453 CDD:400301 28/73 (38%)
twk-35NP_508031.3 Ion_trans_2 <237..294 CDD:285168 25/56 (45%)
Ion_trans_2 347..420 CDD:285168 28/73 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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