DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-39

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001076639.1 Gene:twk-39 / 182864 WormBaseID:WBGene00006690 Length:676 Species:Caenorhabditis elegans


Alignment Length:634 Identity:121/634 - (19%)
Similarity:212/634 - (33%) Gaps:259/634 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly    94 ISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYP-----RTELANAEIRSRTVD 153
            |:..|:..||.||...|:.:|..:|                  ||     :.::.||.:  :.||
 Worm    24 ITHVGLCFLVALYAVAGAFMFQAVE------------------YPYELGLQGKVKNASL--KVVD 68

  Fly   154 RLWSITEDLNILYK---ENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAF 215
            .::......|::.:   :|.::.|.:|.::    ||......:.|.....:  .||.:||::.|.
 Worm    69 DIYRFINRKNVIEETAVKNESQWALKEFEM----LLVHAMNFEGYDEHDEE--RPTFQWTFSGAL 127

  Fly   216 LYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALS------------AGMR 268
            |||:|:.||||||.|.|:|..||:..::|::.|||::||.|:.:.|.|:            |..|
 Worm   128 LYSITVFTTIGYGHICPKTDTGRLLTILYSILGIPLMLLCLANIAETLAQVFTYIYFKLCCAYCR 192

  Fly   269 CLFRRQRVKGG------------------------------------------------------ 279
            ....|:||:..                                                      
 Worm   193 WQKNRRRVRRAALSFRYHPNAAVNVRRVQSSRSNQRYNTVRRHASLNRSRTRSNDTKSVRSFNRY 257

  Fly   280 ------------------PG--------GGPGG-------------GASGGVGSGAGGSGGGRKT 305
                              ||        ..|.|             ||.....:.|.........
 Worm   258 DSTNTQPVQPPRFDTMSLPGRRKISTQSRSPNGTMPRLPNFPQPKRGAHLQKSNTAINMEQLYTD 322

  Fly   306 DKNKGQGHYG------------------HQ------KLHQYG--------------------LPP 326
            :|...:|.:.                  ||      .|..||                    :|.
 Worm   323 EKRSRRGRHAVSESPAREYKGGLLVRAQHQPDEGVVDLKAYGGSAAAFHDLVTRKPRRDDAAVPN 387

  Fly   327 SVYQQQQAQQAQ-------------------QAQQQQAQQAQQAQQQQV---------QQGKKSS 363
            .:..:.:.:..:                   |...::...|::.:::::         |....||
 Worm   388 VIISRTRDEDVKSDPDKTEETSMSLTDDEDMQKPPRRNNSARELREKEMMMMNSLNHKQPSMDSS 452

  Fly   364 GNR-------------------------------RGSPSVPISICVCVLLCYVSSGAILFHKLQN 397
            .:|                               |....:|:|:.:|::..::|.||.||...:|
 Worm   453 TSRRLRDIDGRSYRSDRSERSDEMSLHSLRRNGHRNQEKMPVSVGICIVFAFISGGAWLFSWWEN 517

  Fly   398 WSVLESLYFCFTSLGTIGFGEMAPNGAV------ALYTASAYILVGMAVVAMCFSLIQTEIV--- 453
            |:..:..|:||.:|.|||||::.|..|:      .|...:.|:|.|||::||||.|:|.::|   
 Worm   518 WNGFDGAYYCFITLSTIGFGDIVPGQALDEGSQEKLVVCALYLLFGMALIAMCFKLMQDDVVQKA 582

  Fly   454 LWL--------RRFSVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSL 494
            .||        |.|.:...:...|..|...:|::..:.|......|..:
 Worm   583 RWLGQKIGILARPFELSREIAKHAIFLFGYSVSIRDESSESESDFDDDM 631

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 26/55 (47%)
Ion_trans_2 380..453 CDD:400301 30/78 (38%)
twk-39NP_001076639.1 Ion_trans_2 <120..177 CDD:285168 27/56 (48%)
Ion_trans_2 498..580 CDD:285168 31/81 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
44.020

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