DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-20

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_510284.1 Gene:twk-20 / 181485 WormBaseID:WBGene00006673 Length:364 Species:Caenorhabditis elegans


Alignment Length:516 Identity:105/516 - (20%)
Similarity:187/516 - (36%) Gaps:189/516 - (36%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 SATGVLLLVLLYTAM--GSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWS 157
            ||..:||::..:|.:  |::||..||.|.:             .:.|.|:      .|..|||  
 Worm     8 SARALLLILSTFTYLLFGAMVFDKLESEKD-------------TWVRDEI------ERITDRL-- 51

  Fly   158 ITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLI 222
                   .:|.|::.   :::.||:...::::.|...|            :|.:|.||.::..:|
 Worm    52 -------KHKYNFSE---RDLHLFEAIAIKSIPQQAGY------------QWQFAGAFYFATVVI 94

  Fly   223 TTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGG 287
            ||:|||..:|.|..|::..:::||||:|:.|:...::||.::..:.....:.|            
 Worm    95 TTVGYGHSAPSTNAGKLFCMIFALFGVPMGLIMFQSIGERVNTFIAYSLHKFR------------ 147

  Fly   288 ASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQ 352
                                         ..|||.|.                          ..
 Worm   148 -----------------------------DSLHQQGF--------------------------TC 157

  Fly   353 QQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFG 417
            .|:|            :|:..:.:.:.:....:.||..:||.::.||:.::.|||..:..|||||
 Worm   158 LQEV------------TPTHLLMVSLTIGFMVIVSGTYMFHTIEKWSIFDAYYFCMITFSTIGFG 210

  Fly   418 EMAP--------NGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELAL 474
            ::.|        :..:.::....:||:|:||.:.|.:|:            |...:...|:|   
 Worm   211 DLVPLQQVNALQDQPLYVFATIMFILIGLAVFSACVNLL------------VLGFMASNADE--- 260

  Fly   475 VTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMFFGPAHTLTQYSSLPRRS- 538
            ||.|       ||   :|...:.|........:.....|:.:|.|:...|......||.:|..: 
 Worm   261 VTAA-------QR---EPPSAIVLERFTRNSLVDSQIFNIQKHSTVGVLPGRPRRMYSIVPNSTA 315

  Fly   539 --HLQAANNSGGGSAFQRNTPIRRSTGIPEHHLEYFVPRSISEFNLSGVGDLALPPPRRYS 597
              ||:                 ||||           .|||.:....|... ..||..|:|
 Worm   316 DVHLR-----------------RRST-----------RRSIQDTVCCGCFK-PRPPRHRFS 347

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 21/55 (38%)
Ion_trans_2 380..453 CDD:462301 22/80 (28%)
twk-20NP_510284.1 Ion_trans_2 <78..135 CDD:462301 22/68 (32%)
Ion_trans_2 175..250 CDD:462301 22/86 (26%)

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