DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-44

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_509942.4 Gene:twk-44 / 181349 WormBaseID:WBGene00006694 Length:733 Species:Caenorhabditis elegans


Alignment Length:363 Identity:82/363 - (22%)
Similarity:145/363 - (39%) Gaps:124/363 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   154 RLWSI-TEDLNILYKENWTR-----LAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYA 212
            |.|.: .|..|    :.|||     :..|.|:.:.:::             |:. :..|..||:.
 Worm   211 RCWELGVEGAN----QGWTRYNYSLMVNQSVEEYNNSV-------------GLG-HVLTPVWTFW 257

  Fly   213 SAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFR-RQRV 276
            :|...::|..||||||.|:.:|:.|::||:|||:.|||:||:.|...|.....|:..::. ..|:
 Worm   258 NAMFLAVTTYTTIGYGNITAKTKLGKLAAMVYAVVGIPLVLMILHKSGRLFLMGLEHMWDFILRI 322

  Fly   277 KGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQ 341
            ..          |..||||                                              
 Worm   323 TD----------SFCVGSG---------------------------------------------- 331

  Fly   342 QQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQ-NWSVLESLY 405
                           :|..:::|..|.| .:|:.:.:.|...::...|.:|.:.: :|...:|.|
 Worm   332 ---------------KQRVRNTGEDRIS-EMPLILAIGVAFGWMFLCAAIFLRFEKDWDYFKSFY 380

  Fly   406 FCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAE 470
            |.|.||.|||:|::.|..:..::.....|::|:::|:||.::||.::.   :.|          |
 Worm   381 FFFCSLTTIGYGDVTPTNSEDMFIIFGLIIIGLSLVSMCINVIQLKLE---KLF----------E 432

  Fly   471 ELALVTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALG 508
            ||.|..:        :..:|||.     |..|..|.:|
 Worm   433 ELLLTLM--------EELNADPD-----GTRLKAGTIG 457

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 25/55 (45%)
Ion_trans_2 380..453 CDD:462301 22/73 (30%)
twk-44NP_509942.4 Ion_trans_2 <254..308 CDD:462301 25/53 (47%)
Ion_trans_2 354..>397 CDD:462301 14/42 (33%)

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