DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-18

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001379714.1 Gene:twk-18 / 181139 WormBaseID:WBGene00006672 Length:461 Species:Caenorhabditis elegans


Alignment Length:361 Identity:89/361 - (24%)
Similarity:149/361 - (41%) Gaps:82/361 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly    98 GVLLLVLL--YTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITE 160
            |:|.|::|  ||.:|:.:|..:|||.|....:|......:...||.....:::.:...||.:..|
 Worm    21 GLLPLIILVAYTLLGAWIFWMIEGENEREMLIEQQKERDELIRRTVYKINQLQIKRQRRLMTAEE 85

  Fly   161 DLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGI---QLNAPTHKWTYASAFLYSLTLI 222
            :.|         ..|:.:..||:||             ||   .::...| ||:..:..|.:|:.
 Worm    86 EYN---------RTAKVLTTFQETL-------------GIVPADMDKDIH-WTFLGSIFYCMTVY 127

  Fly   223 TTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGG 287
            ||||||.|.|.|.|||.|.::||..|||:.:|.|..:|...:.|.:.|:|               
 Worm   128 TTIGYGNIVPGTGWGRFATILYAFIGIPLTVLSLYCLGSLFAKGCKMLWR--------------- 177

  Fly   288 ASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPS-VYQQQQAQQAQQAQQQQAQQAQQA 351
                                              :.|..: |..:..:.:..:|    |...::.
 Worm   178 ----------------------------------FFLKSTRVVSKDLSNKISEA----ADNIEEG 204

  Fly   352 QQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGF 416
            ........:|:..|.....|.|||..:.:.:.:|...|:||..|:.|....||||...|..||||
 Worm   205 TTAITPSAEKTENNDDDLLSFPISGLLLITVIWVIFCAVLFTFLEEWDFGTSLYFTLISFTTIGF 269

  Fly   417 GEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEI 452
            |::.|:....:......:|:|:::|:...:|||.:|
 Worm   270 GDILPSDYDFMPIVGVLLLIGLSLVSTVMTLIQQQI 305

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 25/55 (45%)
Ion_trans_2 380..453 CDD:400301 24/73 (33%)
twk-18NP_001379714.1 Ion_trans_2 <114..170 CDD:400301 25/55 (45%)
Ion_trans_2 232..306 CDD:400301 24/74 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
32.820

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