DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-16

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_508526.2 Gene:twk-16 / 180594 WormBaseID:WBGene00006670 Length:555 Species:Caenorhabditis elegans


Alignment Length:442 Identity:86/442 - (19%)
Similarity:160/442 - (36%) Gaps:151/442 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEI-RSRTVDRL 155
            ||    .:|:|||||:.:|..:|..:|..                      |:||: |:..::|.
 Worm    26 HC----SLLMLVLLYSFLGGFIFDRIETN----------------------AHAEMKRNERINRT 64

  Fly   156 WSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLT 220
            ..:::.|:.:::  |:.....:||..:|.       :..:.|...:.:    :|.:.:|.||...
 Worm    65 ACVSQILHSIHR--WSHNQTHKVQYAEDI-------ADCFEPEKDERS----EWNFVTATLYGFG 116

  Fly   221 LITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPG 285
            ::||:||..|:|.|..||:..:||.:.|||:.::.::.:|:.|:                     
 Worm   117 IVTTLGYNRIAPITYTGRMFCIVYGICGIPVTMIIIANVGQYLN--------------------- 160

  Fly   286 GGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQ 350
                    :.||.|       :.|.:.:...:::.:..|...:|::...|....|          
 Worm   161 --------NFAGDS-------RRKIEAYRQQRRMSKASLAGKIYKESSIQVTSLA---------- 200

  Fly   351 AQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQ-NWSVLESLYFCFTSLGTI 414
                                      .:||.|.||:.||:|...|. .......|||.|..|..|
 Worm   201 --------------------------LLCVFLIYVAVGALLLPLLNGELDFFNGLYFNFLCLTAI 239

  Fly   415 GFGEMAPNGAVALYTASAYILVGMAVVAMCFSL------------------IQTEIVLWLRRFSV 461
            .||::.|.....|.....|:.:|:|:..:..::                  .||.|....:...|
 Worm   240 DFGQLVPIRVELLPITFLYVCIGLAITTIAINIGSEYMKKLHYWGKKMKNAAQTRIWFGGKTLKV 304

  Fly   462 QD--HVMPK-------------AEELALVTVAV-----TPKPSXQRPSADPS 493
            :|  |.:.|             .|.:...|:|:     .|:.....|..:||
 Worm   305 RDLLHAVGKKCGVEPGMIDALDLENVVERTIAMQEGREPPEDLNDEPPREPS 356

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 19/55 (35%)
Ion_trans_2 380..453 CDD:462301 23/91 (25%)
twk-16NP_508526.2 Ion_trans_2 <101..159 CDD:462301 19/61 (31%)

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