DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-26

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_508522.2 Gene:twk-26 / 180592 WormBaseID:WBGene00006679 Length:519 Species:Caenorhabditis elegans


Alignment Length:565 Identity:120/565 - (21%)
Similarity:196/565 - (34%) Gaps:192/565 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HCISATGVLLLVLL--YTAMGSIVFVTLEG--ELEDGGALETAVAASK--PYPRTELANAEIRSR 150
            |......|.|:.||  |..:|..:|..||.  ||||  ..||.|....  ....|::.|..:.:.
 Worm    80 HKFGIRHVTLIALLVGYVFLGGFMFEKLESPRELED--LKETIVLMQGIIDEETTDIINVTLSTN 142

  Fly   151 TVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH-KWTYASA 214
            ..||:..:.:.:...||   |.|.|:  ..|..::.....            |...| .|.::||
 Worm   143 GTDRVNKLAKLIKRYYK---TMLEAE--GRFHGSVWHKAE------------NLDMHLMWYFSSA 190

  Fly   215 FLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGE----ALSAGMRCLFRRQR 275
            ..||:||.:|||||.||.:|.|||..:::||..|:||:|:.|..:||    .|:.|...|..:  
 Worm   191 TFYSMTLFSTIGYGTISCQTVWGRTLSMIYASIGLPIMLVVLGDIGEWFQKILTNGYIFLLLK-- 253

  Fly   276 VKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQA 340
                                                    ::||.                    
 Worm   254 ----------------------------------------YKKLR-------------------- 258

  Fly   341 QQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILF----HKLQN---W 398
                               |:....::....:|:.:.:.::|.|:....:..    |...|   .
 Worm   259 -------------------KQPVNRKKNEILLPMWLALFLVLAYILICTLTIKMFDHNEGNKPGI 304

  Fly   399 SVLESLYFCFTSLGTIGFGEMAP-NGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRF--- 459
            ...::.||.|.||.|||.|::.| |...:.:.|:|::| |:|::    |::.|.|...|.:.   
 Worm   305 GFFDAFYFTFISLTTIGLGDVMPYNIQYSPFLAAAFLL-GLALI----SIVNTSIYAQLYQMFFN 364

  Fly   460 ---SVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMF 521
               ||:|.:                    .|..:....|.|..|             ....:.:|
 Worm   365 MINSVEDQL--------------------DRIHSSNHKGPGYKV-------------FHDMEPVF 396

  Fly   522 ------FGPAH--TLTQYSSLPR---RSHLQAANNSGGGSAFQRNTPIRRSTGIPEH---HL--- 569
                  |.|:|  |..:::::.|   |...:....|......:..|  |..:.||.|   ||   
 Worm   397 RMLVCTFPPSHPQTRIKFAAVVRDSFRRDKEKKRESNTSDQIKLRT--RTESDIPAHDGFHLWMT 459

  Fly   570 EYFVPRSISEFNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNM 614
            :....|.:.:.|..      |...||.:|.:    |..||..||:
 Worm   460 KRAKKRQMEQENED------LHAARRRAPTL----GAFGGFDMNL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 27/59 (46%)
Ion_trans_2 380..453 CDD:400301 22/80 (28%)
twk-26NP_508522.2 Ion_trans_2 <185..241 CDD:285168 27/55 (49%)
Ion_trans_2 278..>327 CDD:285168 13/48 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163742
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.850

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