DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-26

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_508522.2 Gene:twk-26 / 180592 WormBaseID:WBGene00006679 Length:519 Species:Caenorhabditis elegans


Alignment Length:565 Identity:120/565 - (21%)
Similarity:196/565 - (34%) Gaps:192/565 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HCISATGVLLLVLL--YTAMGSIVFVTLEG--ELEDGGALETAVAASK--PYPRTELANAEIRSR 150
            |......|.|:.||  |..:|..:|..||.  ||||  ..||.|....  ....|::.|..:.:.
 Worm    80 HKFGIRHVTLIALLVGYVFLGGFMFEKLESPRELED--LKETIVLMQGIIDEETTDIINVTLSTN 142

  Fly   151 TVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH-KWTYASA 214
            ..||:..:.:.:...||   |.|.|:  ..|..::.....            |...| .|.::||
 Worm   143 GTDRVNKLAKLIKRYYK---TMLEAE--GRFHGSVWHKAE------------NLDMHLMWYFSSA 190

  Fly   215 FLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGE----ALSAGMRCLFRRQR 275
            ..||:||.:|||||.||.:|.|||..:::||..|:||:|:.|..:||    .|:.|...|..:  
 Worm   191 TFYSMTLFSTIGYGTISCQTVWGRTLSMIYASIGLPIMLVVLGDIGEWFQKILTNGYIFLLLK-- 253

  Fly   276 VKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQA 340
                                                    ::||.                    
 Worm   254 ----------------------------------------YKKLR-------------------- 258

  Fly   341 QQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILF----HKLQN---W 398
                               |:....::....:|:.:.:.::|.|:....:..    |...|   .
 Worm   259 -------------------KQPVNRKKNEILLPMWLALFLVLAYILICTLTIKMFDHNEGNKPGI 304

  Fly   399 SVLESLYFCFTSLGTIGFGEMAP-NGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRF--- 459
            ...::.||.|.||.|||.|::.| |...:.:.|:|::| |:|::    |::.|.|...|.:.   
 Worm   305 GFFDAFYFTFISLTTIGLGDVMPYNIQYSPFLAAAFLL-GLALI----SIVNTSIYAQLYQMFFN 364

  Fly   460 ---SVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMF 521
               ||:|.:                    .|..:....|.|..|             ....:.:|
 Worm   365 MINSVEDQL--------------------DRIHSSNHKGPGYKV-------------FHDMEPVF 396

  Fly   522 ------FGPAH--TLTQYSSLPR---RSHLQAANNSGGGSAFQRNTPIRRSTGIPEH---HL--- 569
                  |.|:|  |..:::::.|   |...:....|......:..|  |..:.||.|   ||   
 Worm   397 RMLVCTFPPSHPQTRIKFAAVVRDSFRRDKEKKRESNTSDQIKLRT--RTESDIPAHDGFHLWMT 459

  Fly   570 EYFVPRSISEFNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNM 614
            :....|.:.:.|..      |...||.:|.:    |..||..||:
 Worm   460 KRAKKRQMEQENED------LHAARRRAPTL----GAFGGFDMNL 494

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 27/59 (46%)
Ion_trans_2 380..453 CDD:462301 22/80 (28%)
twk-26NP_508522.2 Ion_trans_2 <184..241 CDD:462301 27/56 (48%)
Ion_trans_2 278..>327 CDD:462301 13/48 (27%)

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