DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-36

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_507485.2 Gene:twk-36 / 180164 WormBaseID:WBGene00006688 Length:562 Species:Caenorhabditis elegans


Alignment Length:409 Identity:83/409 - (20%)
Similarity:145/409 - (35%) Gaps:152/409 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWS-----I 158
            :|:|.|:||.:|:.||..:||.                   .|.:...:|.:.:|:|..     :
 Worm   173 LLVLALIYTLLGATVFYLIEGS-------------------NEKSRLHVREQNLDKLLDELATVL 218

  Fly   159 TEDLN------------ILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH-KWT 210
            :|.:|            ...||::..|...|.|....|..|              |..|.: |||
 Worm   219 SEAVNDPEQSSEHQRMKEFIKESYISLQKHEEQYKWSTYYR--------------LEHPDNLKWT 269

  Fly   211 YASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQR 275
            ::|||.:|:.:.||.|||.||.:|..|::..::||...:|:.|:.|..:|:......        
 Worm   270 FSSAFFFSMNVYTTTGYGSISAQTFSGQLFTMIYAFCFVPVTLVILRDLGQMFLVNF-------- 326

  Fly   276 VKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQA 340
                                                     .||:.:||               .
 Worm   327 -----------------------------------------TKLYAHGL---------------T 335

  Fly   341 QQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYV---SSGAILFHKLQ--NWS- 399
            ..::.:..::..:.::.|             :||..|:.:|:.|:   ::...|:..:.  .|. 
 Worm   336 AVRRIRGKREVDEDEIIQ-------------LPIKFCMTILIAYLLLCTTFVYLYDAVMGPEWDD 387

  Fly   400 ---VLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSV 461
               ...:.||.|.||.|||.|::.||........|....:||||         |::|......:|
 Worm   388 GLPYFTAFYFSFISLTTIGLGDVMPNNVPYAPPVSMIFFIGMAV---------TKVVNRATFIAV 443

  Fly   462 QDHVMPKAEELALVTVAVT 480
            ::.|      ..|:|:|.|
 Worm   444 ENGV------FGLMTLAET 456

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 22/55 (40%)
Ion_trans_2 380..453 CDD:400301 21/81 (26%)
twk-36NP_507485.2 Ion_trans_2 255..322 CDD:285168 26/80 (33%)
Ion_trans_2 361..432 CDD:285168 20/79 (25%)
Ion_trans <363..452 CDD:278921 25/103 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
43.910

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