DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-42

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_507483.1 Gene:twk-42 / 180163 WormBaseID:WBGene00006692 Length:444 Species:Caenorhabditis elegans


Alignment Length:417 Identity:96/417 - (23%)
Similarity:171/417 - (41%) Gaps:102/417 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    92 HCISATGVLLLVLLYTAMGSIVFVTLEGELEDG-------GALETAVAASKPYPRTELANAEIRS 149
            |.:...|||   ::|:.:|:.:||..|.|.|..       ..|.|::||.:.:            
 Worm    16 HHLVKIGVL---IVYSFLGAGLFVLCEAENEKSLKHEDNMRVLRTSIAAKQVF------------ 65

  Fly   150 RTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH-KWTYAS 213
              |.||.:       :|..|.   ::.|   |.:|.||.| .|:.....||.:::... :|....
 Worm    66 --VQRLQN-------MYSGNG---SSSE---FSETKLRRV-LSEYDAAMGISIDSKMKTRWDIWG 114

  Fly   214 AFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKG 278
            ...|:.|:.||||||.::..|.|||:..::||:.|||||:..|:..|..|...:           
 Worm   115 GLYYAGTIYTTIGYGDLAAETIWGRICTMLYAMIGIPIVINILNDWGNMLFYFV----------- 168

  Fly   279 GPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQ 343
                                             .|:......|:     :...:|..:.::.|..
 Worm   169 ---------------------------------DHFWQNIGRQW-----IQSLRQKLRRRKVQSL 195

  Fly   344 QAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCF 408
            :.....:....:......|..|..|:..:|:.:.:.||..::......|...:||::.||:||.|
 Worm   196 EEGSIDKTPLMETSSTPPSPQNPNGTRPIPLLLVLIVLFFWMIQCVAYFAYFENWTLFESVYFFF 260

  Fly   409 TSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELA 473
            .|:.|||||:..|:..||: ....:||.|::||:||.::||.::..      :.:.::.:.|...
 Worm   261 ISMTTIGFGDFTPSHTVAV-GGIVFILGGLSVVSMCINVIQMQLEF------IFNQIVQRIENDF 318

  Fly   474 LVTVAVTPKPSXQRP-------SADPS 493
            ..|::|..:.| ::.       |.|||
 Worm   319 KNTLSVAAEESRKKSIGVSEFGSIDPS 345

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 22/55 (40%)
Ion_trans_2 380..453 CDD:400301 28/72 (39%)
twk-42NP_507483.1 Ion_trans_2 <109..165 CDD:285168 22/55 (40%)
Ion_trans_2 236..304 CDD:285168 26/68 (38%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.810

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