DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-34

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_506906.3 Gene:twk-34 / 180054 WormBaseID:WBGene00006686 Length:558 Species:Caenorhabditis elegans


Alignment Length:584 Identity:107/584 - (18%)
Similarity:177/584 - (30%) Gaps:248/584 - (42%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLN 163
            |.|:||.||..|:.:|.|:|...|                         |:.|::|:.::...||
 Worm   169 VALMVLSYTIFGAFMFWTVESRNE-------------------------RAVTLERVTNLENLLN 208

  Fly   164 IL--------YKENWTRLAAQEVQLF----QDTLLRAVRQSKVYPPGGIQLNAPTH----KWTYA 212
            ||        ...|.|...| |:|::    ..:|::...|.|    |........|    |||:.
 Worm   209 ILATNITEIVNNPNTTTTEA-EMQVYIREAYVSLMKLEGQYK----GSTYYKLEDHGKNWKWTFE 268

  Fly   213 SAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVK 277
            |||.:|:.:.||.|||.|:|.:..|:|...:|....:|:.|:.|..:|:.....:..|:      
 Worm   269 SAFFFSMNVYTTTGYGSIAPESILGQVLVCLYGFIFVPVTLVALRDLGQFFLVHLTKLY------ 327

  Fly   278 GGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQ 342
                                                                             
 Worm   328 ----------------------------------------------------------------- 327

  Fly   343 QQAQQAQQAQQQQVQQGKKSSGNRRGSPS----VPISICVCVLLCYVSSGAILFHKLQNWSVLES 403
                      .|.:|:.::.:|:.....:    :||..|:.:|..|::...|..|.....|..||
 Worm   328 ----------AQLIQRWREINGDTSIDVNEIIKIPIKACLLLLALYLAFCTIFIHVFDELSGDES 382

  Fly   404 ---------LYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAM---------------C 444
                     .||.|.||.|||.|::.||.|......|.....|||:..:               .
 Worm   383 GSGMSVFLCFYFSFISLSTIGLGDIMPNNATFSPIISIMFFFGMALTKVVNRNTFIAVENGIFGA 447

  Fly   445 FSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLGVGLGVGLAGGALGQ 509
            .:|::.::          |.::.|.:|:        |....|..:..|.:               
 Worm   448 LTLVENKL----------DGIVRKGKEM--------PDEQKQPKALTPQM--------------- 479

  Fly   510 PQNNLGQHQTMFFGPAHTLTQYSSLPRRSHLQAANNSGGGSAFQRNTPIRRSTGIPEHHLEYFVP 574
                        ...|.::..|.:..|.:..:..||                          |..
 Worm   480 ------------IQRALSVEDYGAAQRENKNEVMNN--------------------------FTV 506

  Fly   575 RSISEFNLSGVGDLALPPPRRYSPNMVGGGGGMGGMGMNMGGMGMNMGMGMGLPHGLQLGPPQT 638
            |||:.|..|.. |:.              |||.|.:.:..|.:       ||..|.:.....:|
 Worm   507 RSIATFMKSNT-DIY--------------GGGFGRVQLRRGDL-------MGSDHQMTTSSEKT 548

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 21/55 (38%)
Ion_trans_2 380..453 CDD:400301 24/96 (25%)
twk-34NP_506906.3 Ion_trans_2 250..319 CDD:285168 23/68 (34%)
Ion_trans_2 366..442 CDD:285168 21/75 (28%)
Ion_trans <387..449 CDD:278921 16/61 (26%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C160163785
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.840

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