DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-8

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001023596.1 Gene:twk-8 / 177727 WormBaseID:WBGene00006663 Length:769 Species:Caenorhabditis elegans


Alignment Length:453 Identity:93/453 - (20%)
Similarity:170/453 - (37%) Gaps:118/453 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 GRQTSTGGS---SSGGGGSKSEKQAAREAGGGGGSLCGCQ------------------KAP---- 89
            ||.::|..:   |||..|.:..:.:...||....:....|                  |.|    
 Worm    11 GRSSNTNRNLRPSSGASGDRLRRPSQMSAGAQSSATRHSQGDKDKVVQSRIHDQEPEVKEPETWG 75

  Fly    90 -------KSHCISATGVLLLVLLYTAMGSIVFVTLE-GELEDGGALETAVAASKPYPRTELANAE 146
                   |.:.|.....|:.::.|..:|:|:|..|| |..||.                  ||.|
 Worm    76 NRFHRMYKEYHIKYLFPLIFIMFYMLIGAIIFYLLESGTAEDA------------------ANEE 122

  Fly   147 IRSRTVDRLWSITEDLNILYKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTH---- 207
                            :..||.....|..:..:|.|||..|    .:.|....::.....:    
 Worm   123 ----------------DYKYKRERRLLLLRMEELVQDTASR----RRAYRKKALEEAIDNYEQKL 167

  Fly   208 --------KWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALS 264
                    :||:.||..::.||.||||||.|:..|..||:|.::|:..|||.:|:.|:.:|:.|.
 Worm   168 DFAVKNESQWTFMSAMYFAGTLFTTIGYGDIACITSAGRIATVIYSCVGIPFMLITLNDLGKFLY 232

  Fly   265 AGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYG-----L 324
            ..:                  .|...|........|..|..:: :|.|::      |.|     |
 Worm   233 NNI------------------NGCVKGFEDFTTYLGAFRLCNR-RGNGNF------QKGDELVTL 272

  Fly   325 PPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGA 389
            .........|.:......:...:..::..:.::..::     |..|.:.:.:.:.:.:.::...:
 Worm   273 EAGTTGTTDAPEVSSLASELGSERNESDYEDIEDEEE-----RSMPRMSVKVALGITVGWIFFCS 332

  Fly   390 ILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCFSLIQTEI 452
            .||...::||..:|.||.|.||.|||.|:::......:.....:::||:::|:|..::||..:
 Worm   333 ALFKLWEDWSYGQSCYFMFISLSTIGLGDVSVQRRDMMVLCFVFVIVGLSLVSMTINVIQVAL 395

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/55 (44%)
Ion_trans_2 380..453 CDD:400301 20/73 (27%)
twk-8NP_001023596.1 Ion_trans_2 169..233 CDD:285168 25/63 (40%)
Ion_trans_2 323..397 CDD:285168 20/73 (27%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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