DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-31

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_001022884.1 Gene:twk-31 / 176572 WormBaseID:WBGene00006683 Length:1136 Species:Caenorhabditis elegans


Alignment Length:527 Identity:119/527 - (22%)
Similarity:210/527 - (39%) Gaps:144/527 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    62 GGGSKSEKQAAREAGGGGG------SLCG-CQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEG 119
            ||.|::......|.||..|      |..| |:.....:.:......:|::||:.:|:.||...|.
 Worm   103 GGFSRAGSLEGVETGGIVGPPMSPISFLGKCKHYYDKYKLDRISASVLLVLYSFLGAWVFYLFEH 167

  Fly   120 ELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILYKENWTRLAA--------- 175
            :.|                      .|::.:  :|:     ||.:|..:.:.|:::         
 Worm   168 DYE----------------------REVKLK--ERI-----DLRMLRNDTFQRISSMVFRQQGLA 203

  Fly   176 --QEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGISPRTQWGR 238
              :||.:..:..|..||..:..            .|.|..|..|..||.||||||.|.|||..||
 Worm   204 NFEEVFIDYEKKLHVVRLPECL------------DWDYWGALFYVGTLFTTIGYGNIYPRTALGR 256

  Fly   239 VAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGR 303
            .|::|||:.|||:||..||..|:.::..:...:::.|::              :...|       
 Worm   257 AASVVYAIVGIPLVLAILSKCGKWMTDSLSEKWQQHRIQ--------------ITEKA------- 300

  Fly   304 KTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRG 368
            |..||:.:|    :|:.:.|              :..:.....:|...::.:|:           
 Worm   301 KMTKNRLRG----KKILKSG--------------EIVEANTGAEADPEKKPEVE----------- 336

  Fly   369 SPSVPISICVCVLLCYVSSGAILFHKLQ-NWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASA 432
            |.::||.:.:.:.:.||:..:.||...: .|:...||||...||.|||.|::.|:..........
 Worm   337 SRTIPIWLALLICVVYVAGCSSLFLLWETRWTFFTSLYFFCISLLTIGLGDIVPDKPHMFIVMFV 401

  Fly   433 YILVGMAVVAMCFSLIQTEIVLWLRRF--SVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLG 495
            .::||:::|:|..|::|.:|..||.|.  .:::..|.|       ...|.|:...:..:.||.|.
 Worm   402 LVIVGLSIVSMFISVVQIKIEEWLCRMIEQIKEEYMKK-------DGLVDPEEIKRIFANDPVLS 459

  Fly   496 VGLGVGLAGGALGQPQNNL--------------GQHQTMF--FGPAHTLTQYSSL----PRRSHL 540
            .     :|...:...||::              .:.||.|  .|.|..:.:|...    |..:||
 Worm   460 F-----VAPKIMSGEQNHMLKDTIKKFDRLLESKEIQTDFPVKGMATQVEKYEQSMACDPMSNHL 519

  Fly   541 QAANNSG 547
            :.|.:.|
 Worm   520 KPAEHQG 526

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 30/55 (55%)
Ion_trans_2 380..453 CDD:400301 22/73 (30%)
twk-31NP_001022884.1 Ion_trans_2 <226..283 CDD:285168 30/56 (54%)
Ion_trans_2 347..423 CDD:285168 23/75 (31%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
21.920

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