DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and twk-3

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_495727.1 Gene:twk-3 / 174321 WormBaseID:WBGene00006658 Length:383 Species:Caenorhabditis elegans


Alignment Length:467 Identity:97/467 - (20%)
Similarity:167/467 - (35%) Gaps:147/467 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 TGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITED 161
            ||::|..:.|...|:.:|:::|...|              ..|.|.|..|.:......:.:||..
 Worm    42 TGLVLSCVTYALGGAYLFLSIEHPEE--------------LKRREKAIREFQDLKQQFMGNITSG 92

  Fly   162 LNILYKENWTRLAAQEVQLFQDTL---LRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLIT 223
            :     ||    :.|.::::...|   |.....:..:....:....|...||::||.:::.|.:.
 Worm    93 I-----EN----SEQSIEIYTKKLILMLEDAHNAHAFEYFFLNHEIPKDMWTFSSALVFTTTTVI 148

  Fly   224 TIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGA 288
            .:|||.|.|.:.:||:..:.|||.|||:.|:.::..|:         |..|.|....|       
 Worm   149 PVGYGYIFPVSAYGRMCLIAYALLGIPLTLVTMADTGK---------FAAQLVTRWFG------- 197

  Fly   289 SGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQ 353
                             |.|.                                            
 Worm   198 -----------------DNNM-------------------------------------------- 201

  Fly   354 QQVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGE 418
                             ::|.:|.||:|..|......:.....|.:.|:|:||..||:.|||||:
 Worm   202 -----------------AIPAAIFVCLLFAYPLVVGFILCSTSNITYLDSVYFSLTSIFTIGFGD 249

  Fly   419 MAPNGAVALYTASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVAVTPKP 483
            :.|:  :.:.....::.||:.:|.:...::..|::   .|.......:.||:|||       .|.
 Worm   250 LTPD--MNVIHMVLFLAVGVILVTITLDIVAAEMI---DRVHYMGRHVGKAKELA-------GKM 302

  Fly   484 SXQRPSADPSLGVGLGVG----LA--GGALGQPQNNLGQHQTMF-FGP--------AHTLTQYSS 533
            .....|.:...|:..|||    ||  |..:|:.:.:..|...:. |.|        ..||:.||.
 Worm   303 FQLAQSLNMKQGLVSGVGQLHALARFGMLVGREEVDKTQEDGIIAFSPDVMDGLEFMDTLSIYSR 367

  Fly   534 LPRRSHLQAANN 545
            ..|||...:|.|
 Worm   368 RSRRSAENSARN 379

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 20/55 (36%)
Ion_trans_2 380..453 CDD:462301 19/72 (26%)
twk-3NP_495727.1 Ion_trans_2 <133..190 CDD:462301 21/65 (32%)
Ion_trans_2 208..283 CDD:462301 21/79 (27%)

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