DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and Kcnk2

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:NP_742039.1 Gene:Kcnk2 / 170899 RGDID:621448 Length:426 Species:Rattus norvegicus


Alignment Length:508 Identity:106/508 - (20%)
Similarity:182/508 - (35%) Gaps:188/508 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLN 163
            :.|:|:||..:|:.||..||                :|        .||..||.          .
  Rat    65 IFLVVVLYLIIGATVFKALE----------------QP--------QEISQRTT----------I 95

  Fly   164 ILYKENWTR----LAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITT 224
            ::.|:|:..    :.:.|:......::.|:....:  |.|...|..:| |...|:|.::.|:|||
  Rat    96 VIQKQNFIAQHACVNSTELDELIQQIVTAINAGII--PLGNNSNQVSH-WDLGSSFFFAGTVITT 157

  Fly   225 IGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGAS 289
            ||:|.|||||:.|::..::|||.|||:....|:.:|:.|..    :|                  
  Rat   158 IGFGNISPRTEGGKIFCIIYALLGIPLFGFLLAGVGDQLGT----IF------------------ 200

  Fly   290 GGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQ 354
               |.|.                                                |:......:.
  Rat   201 ---GKGI------------------------------------------------AKVEDTFIKW 214

  Fly   355 QVQQGKKSSGNRRGSPSVPISICVCVLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEM 419
            .|.|.|     .|...::...:..|||  :|:..|::|..::.||.|:::||...:|.|||||:.
  Rat   215 NVSQTK-----IRIISTIIFILFGCVL--FVALPAVIFKHIEGWSALDAIYFVVITLTTIGFGDY 272

  Fly   420 APNGAVALY------TASAYILVGMAVVAMCFSLIQTEIVLWLRRFSVQDHVMPKAEELALVTVA 478
            ...|:...|      ....:||||:|..|...|:|..    |||..|      .|.:|       
  Rat   273 VAGGSDIEYLDFYKPVVWFWILVGLAYFAAVLSMIGD----WLRVIS------KKTKE------- 320

  Fly   479 VTPKPSXQRPSADPSLGVGLGVGLAGGALGQPQNNLGQHQTMFFGPAHTLTQYSSLPRRSHLQAA 543
                                       .:|:.:.:..:      ..|:...::....||..::..
  Rat   321 ---------------------------EVGEFRAHAAE------WTANVTAEFKETRRRLSVEIY 352

  Fly   544 NNSGGGSAFQRNTPIRR--STGIPEHHLEYFVP--RSISEFNLSGVGDLALPP 592
            :.      |||.|.::|  |..:..:|.:...|  |::|..:|:...:: |||
  Rat   353 DK------FQRATSVKRKLSAELAGNHNQELTPCRRTLSVNHLTSEREV-LPP 398

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 24/55 (44%)
Ion_trans_2 380..453 CDD:400301 26/78 (33%)
Kcnk2NP_742039.1 Ion_trans_2 <139..196 CDD:285168 25/57 (44%)
Ion_trans_2 234..312 CDD:285168 28/83 (34%)
Required for basal channel activity. /evidence=ECO:0000250|UniProtKB:P97438 354..426 14/52 (27%)
Essential for chloroform and halothane sensitivity. /evidence=ECO:0000250|UniProtKB:P97438 378..426 7/22 (32%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166349038
Domainoid 1 1.000 66 1.000 Domainoid score I9664
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.840

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