DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and Kcnk4

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_006526779.1 Gene:Kcnk4 / 16528 MGIID:1298234 Length:444 Species:Mus musculus


Alignment Length:476 Identity:106/476 - (22%)
Similarity:159/476 - (33%) Gaps:177/476 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly    74 EAGGGGGSLCGCQKAPKSHCISATGVLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYP 138
            :||.|.|...|  :..:|..:.|  :|.|||||...|::||..||                  .|
Mouse    34 QAGSGAGPASG--RTMRSTTLLA--LLALVLLYLVSGALVFQALE------------------QP 76

  Fly   139 RTELANAE--------IRSRTVDRLWSITEDLNILY---------KENWTRLAAQEVQLFQDTLL 186
            ..:.|..:        :|........|:.:.:.:|.         :.:||               
Mouse    77 HEQQAQKKMDHGRDQFLRDHPCVSQKSLEDFIKLLVEALGGGANPETSWT--------------- 126

  Fly   187 RAVRQSKVYPPGGIQLNAPTHK--WTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGI 249
                            |:..|.  |...|||.:|.|:|||||||.|...|..||:..:.|||.||
Mouse   127 ----------------NSSNHSSAWNLGSAFFFSGTIITTIGYGNIVLHTDAGRLFCIFYALVGI 175

  Fly   250 PIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHY 314
            |:..:.|:.:|:.|.:.:|                                        :|.||.
Mouse   176 PLFGMLLAGVGDRLGSSLR----------------------------------------RGIGHI 200

  Fly   315 GHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVC 379
            ....| ::.:||                                     |..|...:|...:..|
Mouse   201 EAIFL-KWHVPP-------------------------------------GLVRSLSAVLFLLIGC 227

  Fly   380 VLLCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAY-------ILVG 437
            :|  :|.:...:|..:::||.||::||...:|.|:|||:..|..... ..:.||       ||.|
Mouse   228 LL--FVLTPTFVFSYMESWSKLEAIYFVIVTLTTVGFGDYVPGDGTG-QNSPAYQPLVWFWILFG 289

  Fly   438 MAVVAMCFSLIQTEIVLWLRRFSVQDH------VMPKAEELALVTVAVT-------PKPSXQRPS 489
            :|.    |:.:.|.|..|||..|.:..      ....|.....||..||       |.|..::|.
Mouse   290 LAY----FASVLTTIGNWLRAVSRRTRAEMGGLTAQAASWTGTVTARVTQRTGPSAPPPEKEQPL 350

  Fly   490 ADPSLGVGLGVGLAGGALGQP 510
            ...||.....|....|..|.|
Mouse   351 LPSSLPAPPAVVEPAGRPGSP 371

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 25/57 (44%)
Ion_trans_2 380..453 CDD:400301 23/79 (29%)
Kcnk4XP_006526779.1 Ion_trans_2 <135..189 CDD:369572 25/53 (47%)
Ion_trans_2 227..305 CDD:369572 26/84 (31%)
SucB_Actino <327..>398 CDD:200219 13/45 (29%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167845628
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG1418
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.840

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