DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG42340 and kcnk4a

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_021336981.1 Gene:kcnk4a / 101885817 ZFINID:ZDB-GENE-141211-80 Length:485 Species:Danio rerio


Alignment Length:572 Identity:124/572 - (21%)
Similarity:180/572 - (31%) Gaps:234/572 - (40%)


- Green bases have known domain annotations that are detailed below.


  Fly   206 THKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALS------ 264
            |.:|..::||.:..|:|||||:|.|||:|:.|::..:.|||.|||:..:.|:.:|:.|.      
Zfish    25 TSRWDPSNAFFFCGTIITTIGFGNISPKTKGGQLFCIFYALVGIPMFGILLAGVGDHLGTLLRRA 89

  Fly   265 -AGMRCLFRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSV 328
             |.:..||.|:.||                                               |.||
Zfish    90 VAKVETLFLRKGVK-----------------------------------------------PTSV 107

  Fly   329 YQQQQAQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICV-CVLLCYVSSGAILF 392
                                                   ...|...||.: |  |.:::...::|
Zfish   108 ---------------------------------------RIISAVFSILIGC--LVFIAVPTMVF 131

  Fly   393 HKLQNWSVLESLYFCFTSLGTIGFGE-MAPN--GAVALYTASA--YILVGMAVVAMCFSLIQTEI 452
            .::::||:||::||...:|.|:|||: :|.|  ....||....  :|:.|:|.    |:.|.|.|
Zfish   132 QEVESWSLLEAVYFVVITLTTVGFGDYVAENRRDGTPLYKPLVWLWIVFGLAY----FASILTMI 192

  Fly   453 VLWLRRFSVQDHVMPKAEELALVTVAVTPKPSXQRPSADPSLGVGLGV----------------- 500
            ..|||..|.:    .:||...|...|.....:.|..|.|..:.|.|.:                 
Zfish   193 GNWLRVLSKK----TRAEMEELRAHATDWTQNIQNMSMDFRIPVPLDLNDPFQLQRRRRRKRHHH 253

  Fly   501 -------------GLAGG--------------ALGQPQNNL-----------------GQHQTMF 521
                         ||..|              .||.|....                 |.|..|.
Zfish   254 HHHHHRHPRPNTTGLTHGISLDADIIRENGHLILGWPTCRYKPASEVLSQSRSMSRIDGAHYEMR 318

  Fly   522 FGPAHTLTQYSSLPRRSHLQAANNSG------------GGSAFQRNTPIRRSTGIPEHHLEYFVP 574
            .|...|:...|....|..|:.|:.:|            .||.....||   |....|:..|....
Zfish   319 PGSRLTVGPTSRSISRLELKPASRAGSRAISRSPSQSESGSFSASETP---SESWSEYEYESNSC 380

  Fly   575 RS--------ISEFNLSGVGDLAL------PPPRRYSPNMVGGGG---------------GMGGM 610
            .|        .|..:|....|:.:      .|||   |:::...|               .:...
Zfish   381 NSEDVESGAKASRRSLESQNDVPIVVVASCSPPR---PSLLDFFGENLAYIDESSDALSDRVKPS 442

  Fly   611 GMNMGGMGMNMGMGMGLPHGLQ------LGPPQTLLCSAAPTVQQQQQPPPP 656
            |.|.........|....|.|||      |.||     |..||      ||||
Zfish   443 GQNRQRRPKRRSMTKRQPAGLQREVSNELQPP-----SHPPT------PPPP 483

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 23/55 (42%)
Ion_trans_2 380..453 CDD:400301 23/77 (30%)
kcnk4aXP_021336981.1 Ion_trans_2 24..80 CDD:311712 23/54 (43%)
Ion_trans_2 116..197 CDD:311712 27/86 (31%)
THRAP3_BCLAF1 329..>419 CDD:317794 20/95 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170590266
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
32.940

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