DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk12

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_002935426.2 Gene:kcnk12 / 100494329 XenbaseID:XB-GENE-1012003 Length:428 Species:Xenopus tropicalis


Alignment Length:388 Identity:80/388 - (20%)
Similarity:139/388 - (35%) Gaps:154/388 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly   101 LLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNIL 165
            :.:|||...|:.||.|:|                    |...|.|..|..|:.|.:|.:.::::|
 Frog    28 VFILLYLIAGATVFSTIE--------------------RPSEALAHTRWNTILRNFSHSFNISVL 72

  Fly   166 YKENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPTHKWTYASAFLYSLTLITTIGYGGI 230
                       |::.|       ::..:.....||:.:|...:|.:..||.:..|:::|||:|..
 Frog    73 -----------ELRSF-------LKDYEAAMAAGIRADALRPRWDFTGAFYFVGTVVSTIGFGMT 119

  Fly   231 SPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGM-----RCLFRRQRVKGGPGGGPGGGASG 290
            :|.|..|:|..:.|.|||....:|:.:...|.:.:.:     .|..||.|..|            
 Frog   120 TPATITGKVFLIFYGLFGCAGTILFFNLFLERIISLLAFVMKACHERRLRRSG------------ 172

  Fly   291 GVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQ 355
                                            .|||:|                           
 Frog   173 --------------------------------LLPPTV--------------------------- 178

  Fly   356 VQQGKKSSGNRRGS------------PSV-----PISICVCVLLCYVSSGAILFHKLQNWSVLES 403
                      ||||            |||     .:.|...:|.|..|:   ::..::.|:.::|
 Frog   179 ----------RRGSAVSEVDSLVGWKPSVYHVMLILGIFAIILSCCASA---MYTPVEGWNYIDS 230

  Fly   404 LYFCFTSLGTIGFGEM-APNGAVALYTA------SAYILVGMAVVAMCF---SLIQTEIVLWL 456
            ||:||.:..|||||:: :...||..|..      ..:||:|:..:...|   |::..:::.||
 Frog   231 LYYCFVTFSTIGFGDLVSSQNAVYQYQGLYRFGNFMFILLGVCCIYSLFNVISIVIKQVLNWL 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 18/55 (33%)
Ion_trans_2 380..453 CDD:400301 22/82 (27%)
kcnk12XP_002935426.2 Ion_trans_2 81..153 CDD:369572 21/71 (30%)
Ion_trans_2 206..286 CDD:369572 23/82 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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