DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk4

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_002940275.1 Gene:kcnk4 / 100488063 XenbaseID:XB-GENE-994204 Length:430 Species:Xenopus tropicalis


Alignment Length:371 Identity:87/371 - (23%)
Similarity:136/371 - (36%) Gaps:141/371 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   102 LVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRSRTVDRLWSITEDLNILY 166
            :||.|...|::||..||...|   ||:.:                              .||   
 Frog    12 VVLGYLVTGAVVFQMLEQPFE---ALKQS------------------------------QLN--- 40

  Fly   167 KENWTRLAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNA----PTHKWTYASAFLYSLTLITTIGY 227
             |:......:.:.|.:|.|...:.|.|.....|:..:|    .|.:|...|.|.::.|:||||||
 Frog    41 -EHRRAFLDEHICLQEDRLDEFIEQVKEAIGSGVDPSANATNVTTRWDIGSCFFFAGTIITTIGY 104

  Fly   228 GGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRRQRVKGGPGGGPGGGASGGV 292
            |..:|:|..|::..:.|||.|||:..:.|:.:|:.|.:.:|                        
 Frog   105 GNNAPKTDGGQIFCIFYALVGIPLFGILLAGVGDHLGSSLR------------------------ 145

  Fly   293 GSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQAQQAQQAQQQQAQQAQQAQQQQVQ 357
                            ||.|     |:....|...|                             
 Frog   146 ----------------KGIG-----KVEMLFLKWHV----------------------------- 160

  Fly   358 QGKKSSGNRRGSPSV--PISICVCVL---LCYVSSGAILFHKLQNWSVLESLYFCFTSLGTIGFG 417
                       |.::  .||..:.:|   |.:|.....:|.|::||::|||:||...:|.|.|||
 Frog   161 -----------SATIVRVISALLFILIGCLLFVLIPMFIFQKIENWTLLESIYFVVITLTTTGFG 214

  Fly   418 E-MAPNGAVALYT-----ASAYILVGMAVVAMCFSLIQTEIVLWLR 457
            : :|.:||...:|     ...:||:|:|.    |:.|.|.|..|||
 Frog   215 DYVAGDGAGHEHTWYKPVVWFWILLGLAY----FASILTMIGNWLR 256

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 22/55 (40%)
Ion_trans_2 380..453 CDD:462301 28/81 (35%)
kcnk4XP_002940275.1 Ion_trans_2 <85..138 CDD:462301 21/52 (40%)
Ion_trans_2 178..256 CDD:462301 29/81 (36%)

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