DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk18

DIOPT Version :9

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_031761959.1 Gene:kcnk18 / 100486306 XenbaseID:XB-GENE-6257492 Length:429 Species:Xenopus tropicalis


Alignment Length:403 Identity:96/403 - (23%)
Similarity:177/403 - (43%) Gaps:62/403 - (15%)


- Green bases have known domain annotations that are detailed below.


  Fly    87 KAPKSHCISATGVLLL--VLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELANAEIRS 149
            |..::..||...|.|:  ::||:.:|:::|..:||..|                 .|::..|   
 Frog    36 KCLQAFWISFPHVCLVCSLVLYSILGALMFWFIEGSRE-----------------KEISQFE--- 80

  Fly   150 RTVDRLWSITEDLNILYKENWT---RLAAQEV--QLFQDTLLRAVRQSKVYPPGGIQLNAPTHKW 209
            ..:::||.|.::.:|   :|.|   ..:|.|:  :|.::.::..::..        .|..|..:|
 Frog    81 EFLEKLWMIVQNSSI---DNATISDNGSAPEIFKELAREAIITDLQVE--------WLQKPEEQW 134

  Fly   210 TYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCLFRR- 273
            ::.|:..:..|:.||:|||.|.|.|.:|::|.:|||..|||::||.|:.:|:.|:..:...::| 
 Frog   135 SFKSSLFFCCTVFTTVGYGHICPVTMYGKLACMVYATLGIPLMLLLLADLGDILARLLSRTYKRA 199

  Fly   274 -----------QRVKGGPGGGPGGGASG---GVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGL 324
                       :.:|.........|.|.   .:.|..........|:..|.|.....:.|....:
 Frog   200 VLACNKLCHKPKPIKLSSLHKEHSGKSSLLKTMDSRVSMKEPLNITEVIKTQASVKRKYLQMRNI 264

  Fly   325 P----PSVYQQQQAQQAQQAQQQQAQQAQQAQ----QQQVQQGKKSSGNRRGSPSVPISICVCVL 381
            .    ..|.:.|:....:.:.||::.......    .....|.....|.......|||.:.|.|:
 Frog   265 DIFELIIVKENQKVLPLKSSLQQKSFSCPDLDLWPPSDSAMQNFDKIGEELDHLDVPIVLIVLVM 329

  Fly   382 LCYVSSGAILFHKLQ-NWSVLESLYFCFTSLGTIGFGEMAPNGAVALYTASAYILVGMAVVAMCF 445
            :.|:..||.:....: :|:.:::.||||.:|.|||||::.|.........|||.:|||.:|.|.|
 Frog   330 VAYIMCGACILPLWEDDWTTIDAFYFCFVTLTTIGFGDIIPKHPNYFLLLSAYTVVGMVIVCMAF 394

  Fly   446 SLIQTEIVLWLRR 458
            .|.|..:|.:.::
 Frog   395 KLGQNRLVSFYKQ 407

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:400301 23/55 (42%)
Ion_trans_2 380..453 CDD:400301 27/73 (37%)
kcnk18XP_031761959.1 Ion_trans_2 <131..>175 CDD:400301 17/43 (40%)
Ion_trans_2 327..402 CDD:400301 27/74 (36%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D542195at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR11003
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.110

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