DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42340 and kcnk13

DIOPT Version :10

Sequence 1:NP_001368973.1 Gene:CG42340 / 7354472 FlyBaseID:FBgn0259242 Length:759 Species:Drosophila melanogaster
Sequence 2:XP_002933246.1 Gene:kcnk13 / 100485106 XenbaseID:XB-GENE-983023 Length:409 Species:Xenopus tropicalis


Alignment Length:397 Identity:81/397 - (20%)
Similarity:139/397 - (35%) Gaps:130/397 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    84 GCQKAPKSHCISATG----VLLLVLLYTAMGSIVFVTLEGELEDGGALETAVAASKPYPRTELAN 144
            ||......|.....|    :.:|::||...|:.||..:|                  .|:.:.| 
 Frog     5 GCCCCGFGHINEDNGRFLLLAILIILYLLCGAAVFSAIE------------------QPKEKEA- 50

  Fly   145 AEIRSRTVDRLWSITEDLNILYKENWTR---LAAQEVQLFQDTLLRAVRQSKVYPPGGIQLNAPT 206
                                  ||.|.:   ..:|:..|....|...:|..:.....||::::..
 Frog    51 ----------------------KERWQQKFDTFSQKYNLNVSDLRNFLRDYEEANVAGIRVDSIR 93

  Fly   207 HKWTYASAFLYSLTLITTIGYGGISPRTQWGRVAALVYALFGIPIVLLYLSAMGEALSAGMRCL- 270
            .:|.:..||.:..|:::|||:|..:|.|..|::..:.|.|.|....:|:.:...|.|...:..: 
 Frog    94 PRWDFTGAFYFVGTVVSTIGFGMTTPATIAGKIFLIFYGLIGCAATILFFNLFLERLITVIAYIM 158

  Fly   271 --FRRQRVKGGPGGGPGGGASGGVGSGAGGSGGGRKTDKNKGQGHYGHQKLHQYGLPPSVYQQQQ 333
              |..:::|                     ..||...:..:|.||.....|  .|..||||.   
 Frog   159 KSFHERQLK---------------------RKGGLPPETRRGSGHSEVDSL--AGWKPSVYY--- 197

  Fly   334 AQQAQQAQQQQAQQAQQAQQQQVQQGKKSSGNRRGSPSVPISICVC--VLLCYVSSGAILFHKLQ 396
                                                  |.:.:||.  ::.|..|:   :|..::
 Frog   198 --------------------------------------VMLILCVASIIISCCASA---MFSPIE 221

  Fly   397 NWSVLESLYFCFTSLGTIGFGEMA-------PNGAVALYTASAYILVGMAVVAMCFSLIQTEI-- 452
            .|...:||||||.:..|||||:|.       .|..:..:....:||:|:..:...|::|...|  
 Frog   222 GWGYFDSLYFCFVAFSTIGFGDMVSSQKAKYENQGLYRFGNFIFILMGVCCIYSLFNVISIVIKQ 286

  Fly   453 -VLWLRR 458
             |.|:.|
 Frog   287 CVNWILR 293

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42340NP_001368973.1 Ion_trans_2 <208..264 CDD:462301 16/55 (29%)
Ion_trans_2 380..453 CDD:462301 23/82 (28%)
kcnk13XP_002933246.1 Ion_trans_2 <94..151 CDD:462301 16/56 (29%)
Ion_trans_2 213..286 CDD:462301 22/75 (29%)

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