DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42342 and Col25a1

DIOPT Version :10

Sequence 1:NP_001189234.1 Gene:CG42342 / 7354466 FlyBaseID:FBgn0259244 Length:831 Species:Drosophila melanogaster
Sequence 2:XP_006502327.1 Gene:Col25a1 / 77018 MGIID:1924268 Length:707 Species:Mus musculus


Alignment Length:802 Identity:303/802 - (37%)
Similarity:371/802 - (46%) Gaps:215/802 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    85 ISNNSSNSSSSKERPRP-------TVRFISLLHVASYVLCLCAFSFALYGNVRQTRLEQRMQRLQ 142
            ::.......|..|.|||       |:...:.|   :.:|.:.|.:|..|..|          :..
Mouse     6 LAGKGGGRESGSEDPRPLGQRCAGTMPSCTAL---ATLLSVVAVAFCFYLGV----------KTN 57

  Fly   143 QLDARIVELELRLEQQQLLHWPAEQTQVLASHP-SDRDSSNSNNGSQHLELHVRRELHRLRRDVS 206
            .|.|||..||           .|:.|.  :.|| ||.        ...|:..|:.::.||....|
Mouse    58 DLQARIAALE-----------SAKGTP--SFHPLSDT--------VDELKAMVQEKVERLLAQKS 101

  Fly   207 HLQLTRRQQRRQAAEAAAAAASGEGGSGGGQCQCQPGPPGPPGPPGKRGKRGKKGDSGEKGDPGL 271
            :..:.:.:..|:|..               :|.|      |.||||||||||::|:||..|.||.
Mouse   102 YEHMAKIRTAREAPL---------------ECNC------PAGPPGKRGKRGRRGESGPPGQPGP 145

  Fly   272 NGISGEKGAAGKPGDKGQKGDVGHPGMDVFQTVKGLKRSVTTLHGGTLGYAEIVAVK----DLQE 332
            .|..|.|      ||||::||.| |.| ||..:.         ||......:::..:    |..:
Mouse   146 QGPPGPK------GDKGEQGDQG-PRM-VFPKIN---------HGFLSADQQLIKRRLIKGDQGQ 193

  Fly   333 AGVNVSASTVIKLKGEPGEPGPPGPPGEAGQ------PGAPGERGPPGEIGAQGP---------- 381
            ||.          .|.||.|||.||||:.|:      ||.|||.|.|||.|..||          
Mouse   194 AGP----------PGPPGPPGPRGPPGDTGKDGPRGMPGVPGEPGKPGEQGLMGPLGPPGQKGSI 248

  Fly   382 -----------QGEAGQPGVAGP---PGVAGAPGTKGDKGDRGDRGL--TTTIKGDEFPTGI-IE 429
                       :||.|.||.||.   ||..|.||.:|:|||.|:.|.  .|..|||...:.. |:
Mouse   249 GAPGTPGMDGQKGEPGSPGAAGQSGLPGPKGEPGKEGEKGDAGENGPKGDTGEKGDPGSSAAGIK 313

  Fly   430 GPPGPAGPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGKRIFGPG--GTKIDEDYDDPPVTLL 492
            |.||.:|.||..||||..|.||..|..|.||..||:|:.|.    ||  |||.|.....||....
Mouse   314 GEPGESGRPGQKGEPGLPGLPGLPGIKGEPGFIGPQGEPGL----PGLPGTKGDRGEAGPPGRGE 374

  Fly   493 RGPPGPPGIAGKDGRDGR---DGSKGEPGEPGEPGSLGPRGLDGLPGEPG--------------- 539
            ||.||.||..||.|..|.   .||||:.|:.|:.|:|||||..|..|:||               
Mouse   375 RGDPGAPGPKGKQGESGARGPKGSKGDRGDKGDSGALGPRGPPGQKGDPGATEIIDYNGNLHEAL 439

  Fly   540 -------IEGPPGLP---GYQGPPGE------------------KGDRGDIGPPGLMGPPGLPGP 576
                   :.||||.|   |.|||.||                  |||.||.|.||..|..||||.
Mouse   440 QRITTLTVTGPPGPPGPQGLQGPKGEQGSPGIPGVDGEQGLKGSKGDMGDPGVPGEKGGLGLPGL 504

  Fly   577 PGYPGVKGDKGDRGDSYRKMRRRQDDGMSDAPHMPTIEYLYGPPGPPGPMGPPG----H--TGSQ 635
            ||..||||:|||.|              ...|..|:|   .||||||||.||||    |  .|.:
Mouse   505 PGANGVKGEKGDTG--------------LPGPQGPSI---IGPPGPPGPHGPPGPMGPHGLPGPK 552

  Fly   636 GERGLDGRKGDPGEKGHKGDQGPMGLPGPMGM------RGESGPSGPSGKAGIPGPPGLDGMKGA 694
            ||.||:|.||..||.|.|||:||:||||..|:      ||..||.||.|.|   ||.|..|.|||
Mouse   553 GEPGLNGVKGLKGEPGQKGDRGPLGLPGASGLDGKPGSRGADGPIGPHGPA---GPKGERGEKGA 614

  Fly   695 QGETGHKGERGDPGL---PGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDA 756
            .||.|.:|..|.||.   ||.||.||..|.:|:.|.:|:.|..||:|::|.:|:|||||.|||||
Mouse   615 MGEPGPRGPYGLPGKDGEPGLDGFPGPRGEKGDLGEKGEKGEKGKKGKRGPKGEKGEQGAPGLDA 679

  Fly   757 PCPLGADGLPLPGCGWRPPKEP 778
            |||||.||||:||| |:....|
Mouse   680 PCPLGPDGLPMPGC-WQKGVTP 700

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42342NP_001189234.1 DUF2046 <133..210 CDD:401633 17/77 (22%)
gly_rich_SclB <249..>413 CDD:468478 75/197 (38%)
gly_rich_SclB <368..>560 CDD:468478 101/266 (38%)
gly_rich_SclB <527..>757 CDD:468478 126/287 (44%)
Col25a1XP_006502327.1 Collagen 216..271 CDD:460189 18/54 (33%)
gly_rich_SclB <257..>495 CDD:468478 96/241 (40%)
gly_rich_SclB <371..>634 CDD:468478 119/282 (42%)

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