Protein Alignment CG42342 and Col13a1

DIOPT Version :9

• Sequence 1: NP_001189234.1
• Gene: CG42342 / 7354466
• FlyBaseID: FBgn0259244
• Length: 831
• Species: Drosophila melanogaster
• Sequence 2: XP_038954943.1
• Gene: Col13a1 / 499431
• RGDID: 1595704
• Length: 798
• Species: Rattus norvegicus
• Alignment Length: 775
• Identity: 270/775 - (34%)
• Similarity: 339/775 - (43%)
• Gaps: 217/775 - (28%)

  Fly   116 LCLCAFSFALYGNVRQTRLEQRMQRLQQLDARIVELELRLEQQQLLHWPAEQTQVLASHPSDRDS 180
            |.||:.:.:|..:.|...|:.|:.||:
  Rat    48 LALCSLALSLLAHFRTAELQARVLRLE-------------------------------------- 74

  Fly   181 SNSNNGSQHLELHVRRELHRLRRDVSHLQLTRRQQRRQAAEAAAAAASGEGGSGGGQCQCQPGPP 245
              |..|.|.:|..:...:::| .|......:||  ||:|.:.:..            |.|.||||
  Rat    75 --SERGEQQMEKAILGRVNQL-LDEKWKFYSRR--RREAPKMSPG------------CNCPPGPP 122

  Fly   246 GPPGPPGKRGKRGK---------KGDSGEKGDPGLNGIS-----------------------GEK 278
            ||.|.||..|.:|.         ||..||||.||..|||                       |..
  Rat   123 GPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLD 187

  Fly   279 GAAGKPGDKGQKGDVGHPGMDVFQTVKGLKRSV-----TTLHGGTLGYAE---IVAVKDLQEA-G 334
            |..|.||.||:.|.||..|....|..||.|...     .....|||....   |:::|.|... .
  Rat   188 GRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKLLPLLNS 252

  Fly   335 VNVSASTVIK------------LKGEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGP------ 381
            |.::...|||            ::|.||.||||||.|..|.||.||..||||..|..||
  Rat   253 VRLAPPPVIKRRTFQGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGI 317

  Fly   382 --------------------------------QGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGL 414
                                            :||.|.||..|..|..|:||..|.||::||.|
  Rat   318 QGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAG- 381

  Fly   415 TTTI---KGDEFPTGIIEGPPGPA------GPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGK 470
             ..|   :|:..|.| :.|||||.      |..||||:.|.:|:||..|..||.|.||.:|:.||
  Rat   382 -NAIGGGRGEPGPPG-LPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGK 444

  Fly   471 RIFGPGGTKIDEDYDDPPVTLLRGPPGPPGIAGKDGRDGRDGSKGEPGEPGEPGSLGPRGLDGLP 535
            .......:.|:|...:.....|.||||.||..|..|..|..|.:||.|.||.||..|.:|..|.|
  Rat   445 GEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKP 509

  Fly   536 GE---------PGIEGPPGLPGYQGP---PGEKGDRGDIGPPGLMGP---------------PGL 573
            |:         ||.:||||:.|..||   |||||:.|..|||||.||               .||
  Rat   510 GDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGL 574

  Fly   574 PGPPGYPGVKGDKGDRGDSYRKMRRRQDDGMSDAPHMPTIEYLYGPPGPPGPMGPP---GHTGSQ 635
            |||.|.||..|:||:.|:       :.|.| ::.|         |||||.||.|||   |..|.:
  Rat   575 PGPIGLPGFTGEKGEAGE-------KGDPG-AEVP---------GPPGPEGPPGPPGLQGIPGPK 622

  Fly   636 GERGLDGRKGDPGEKGHKGDQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGH 700
            ||.||||.||:.|.:|.|||:||:||||..|:.|..||.|..|..|:|||      .|.:||.|.
  Rat   623 GEAGLDGSKGEKGSQGEKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGP------AGPKGERGS 681

  Fly   701 KGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPL 760
            ||:.|..|..|..|:||..||.|::|:|      |.||.||::|:.|..|:.||||||||
  Rat   682 KGDPGMTGPTGAAGLPGLHGPPGDKGNR------GHRGFKGEKGEPGLPGLDGLDAPCPL 735

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42342	NP_001189234.1	DUF4763	130..>210	CDD:292582	11/79 (14%)
		Collagen	366..413	CDD:189968	24/84 (29%)
		Collagen	660..718	CDD:189968	25/57 (44%)
		Collagen	690..748	CDD:189968	23/57 (40%)
Col13a1	XP_038954943.1	Collagen	175..220	CDD:396114	15/44 (34%)
		Collagen	531..582	CDD:396114	22/50 (44%)
		Collagen	680..728	CDD:396114	22/53 (42%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E33208_3BG4N
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	1	1.050	370	1.000	Inparanoid score	I2063
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X3195
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	4	3.950