Protein Alignment CG42342 and Col13a1

DIOPT Version :10

• Sequence 1: NP_001189234.1
• Gene: CG42342 / 7354466
• FlyBaseID: FBgn0259244
• Length: 831
• Species: Drosophila melanogaster
• Sequence 2: NP_001102642.1
• Gene: Col13a1 / 499431
• RGDID: 1595704
• Length: 739
• Species: Rattus norvegicus
• Alignment Length: 787
• Identity: 279/787 - (35%)
• Similarity: 345/787 - (43%)
• Gaps: 227/787 - (28%)

  Fly   116 LCLCAFSFALYGNVRQTRLEQRMQRLQQLDARIVELELRLEQQQLLHWPAEQTQVLASHPSDRDS 180
            |.||:.:.:|..:.|...|:.|:.||:
  Rat    48 LALCSLALSLLAHFRTAELQARVLRLE-------------------------------------- 74

  Fly   181 SNSNNGSQHLELHVRRELHRLRRDVSHLQLTRRQQRRQAAEAAAAAASGEGGSGGGQCQCQPGPP 245
              |..|.|.:|..:...:::| .|......:||  ||:|.:.:..            |.|.||||
  Rat    75 --SERGEQQMEKAILGRVNQL-LDEKWKFYSRR--RREAPKMSPG------------CNCPPGPP 122

  Fly   246 GPPGPPGKRGKRGK---------KGDSGEKGDPGLNGIS-----------------------GEK 278
            ||.|.||..|.:|.         ||..||||.||..|||                       |..
  Rat   123 GPTGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGISIIGPRGPPGQPGTRGFPGFPGPIGLD 187

  Fly   279 GAAGKPGDKGQKGDVGHPGMDVFQTVKGLKRSV-----TTLHGGTLGYAE---IVAVKDLQEA-G 334
            |..|.||.||:.|.||..|....|..||.|...     .....|||....   |:::|.|... .
  Rat   188 GRPGHPGPKGETGLVGPRGQPGPQGQKGEKGQCGEYPHREYPSGTLAALRSNPIISLKLLPLLNS 252

  Fly   335 VNVSASTVIK------------LKGEPGEPGPPGPPGEAGQPGAPGERGPPGEIGAQGP------ 381
            |.::...|||            ::|.||.||||||.|..|.||.||..||||..|..||
  Rat   253 VRLAPPPVIKRRTFQGEQSQAGIQGPPGPPGPPGPIGPLGHPGLPGPIGPPGLPGPPGPKGDPGI 317

  Fly   382 --------------------------------QGEAGQPGVAGPPGVAGAPGTKGDKGDRGDRGL 414
                                            :||.|.||..|..|..|:||..|.||::||.|
  Rat   318 QGYHGRKGERGLPGMPGKHGAKGAPGIAVAGMKGEPGTPGAKGEKGATGSPGLLGQKGEKGDAG- 381

  Fly   415 TTTI---KGDEFPTGIIEGPPGPA------GPPGPPGEPGARGEPGPIGPAGPPGEKGPRGKRGK 470
             ..|   :|:..|.| :.|||||.      |..||||:.|.:|:||..|..||.|.||.:|:.||
  Rat   382 -NAIGGGRGEPGPPG-LPGPPGPKGEAGVDGQAGPPGQQGDKGQPGAAGEPGPTGPKGSKGEPGK 444

  Fly   471 RIFGPGGTKIDEDYDDPPVTLLRGPPGPPGIAGKDGRDGRDGSKGEPGEPGEPGSLGPRGLDGLP 535
            .......:.|:|...:.....|.||||.||..|..|..|..|.:||.|.||.||..|.:|..|.|
  Rat   445 GEMVDYNSSINEALQEIRTLALMGPPGLPGQTGPPGPPGTPGQRGEIGLPGPPGHDGDKGPRGKP 509

  Fly   536 GE---------PGIEGPPGLPGYQGP---PGEKGDRGDIGPPGLMGP---------------PGL 573
            |:         ||.:||||:.|..||   |||||:.|..|||||.||               .||
  Rat   510 GDMGPAGPQGPPGKDGPPGMKGEVGPPGNPGEKGETGQAGPPGLDGPTGEKGEPGDEGRPGATGL 574

  Fly   574 PGPPGYPGVKGDKGDRGDSYRKMRRRQDDGMSDAPHMPTIEYLYGPPGPPGPMGPP---GHTGSQ 635
            |||.|.||..|:||:.|:       :.|.| ::.|         |||||.||.|||   |..|.:
  Rat   575 PGPIGLPGFTGEKGEAGE-------KGDPG-AEVP---------GPPGPEGPPGPPGLQGIPGPK 622

  Fly   636 GERGLDGRKGDPGEKGHKGDQGPMGLPGPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGH 700
            ||.||||.||:.|.:|.|||:||:||||..|..|..||:||.|:.|..|.||:.|..||
  Rat   623 GEAGLDGSKGEKGSQGEKGDRGPLGLPGTPGPIGVPGPAGPKGERGSKGDPGMTGPTGA------ 681

  Fly   701 KGERGDPGLPGTDGIPGQEGPRGEQGSRGDAGPPGKRGRKGDRGDKGEQGVPGLDAPCPLGADGL 765
                  .||||..|.||.:|.|||:|.:|..||         :||||:||.||||||||||.|||
  Rat   682 ------AGLPGLHGPPGDKGNRGERGKKGSRGP---------KGDKGDQGAPGLDAPCPLGEDGL 731

  Fly   766 PLPGCGW 772
            |:.|| |
  Rat   732 PVQGC-W 737

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
CG42342	NP_001189234.1	DUF2046	<133..210	CDD:401633	10/76 (13%)
		gly_rich_SclB	<249..>413	CDD:468478	78/254 (31%)
		gly_rich_SclB	<368..>560	CDD:468478	90/250 (36%)
		gly_rich_SclB	<527..>757	CDD:468478	112/259 (43%)
Col13a1	NP_001102642.1	gly_rich_SclB	<135..>381	CDD:468478	74/245 (30%)
		gly_rich_SclB	<357..>600	CDD:468478	100/253 (40%)
		gly_rich_SclB	<492..>723	CDD:468478	117/268 (44%)