Sequence 1: | NP_001189234.1 | Gene: | CG42342 / 7354466 | FlyBaseID: | FBgn0259244 | Length: | 831 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001102145.1 | Gene: | Col9a2 / 362584 | RGDID: | 1307029 | Length: | 688 | Species: | Rattus norvegicus |
Alignment Length: | 710 | Identity: | 248/710 - (34%) |
---|---|---|---|
Similarity: | 296/710 - (41%) | Gaps: | 235/710 - (33%) |
- Green bases have known domain annotations that are detailed below.
Fly 237 QCQCQPGPPGPPGPPGKRGKRGKKGDSGEKGDPGLNGISGEKGAAGKPGDKGQKGDVGHPGMDVF 301
Fly 302 QTVKGLKRSVTTLHGGTLGYAEIVAVKDLQEAGVNVSASTVIKLKGEPGEPGPPGPPGE--AGQP 364
Fly 365 GAPGERGPPGEIGAQGPQGEAGQPGVAGPPGVAGAPGTKG-----------------DKGDRGDR 412
Fly 413 GLTTTIKGDEFPTGII-----EGPPGPAGP---------PGPPGEPGARGEPGPIGP-------- 455
Fly 456 ----------AGPPGEKGPRGKRG----KRIFGPGGTKIDEDYDDPPVTLLRGPPGPPGIAGKDG 506
Fly 507 RDGRDGSKGEPGEPGEPGSLGPRGLDGLPGEPGIEGPP---------GLPGYQGPP--------- 553
Fly 554 ---------GEKGDRGDIGPPGLMGP------------PGLPGPPGYPGVKGDKGDRGDSYRKMR 597
Fly 598 RRQDDGMSDAPHMPTIEYLYGPPGPPGPMGPPGHTGSQGERGLDGRKGDPGEKGHKGDQGPMGLP 662
Fly 663 GPMGMRGESGPSGPSGKAGIPGPPGLDGMKGAQGETGHKGERGD--------------------- 706
Fly 707 ------------------PGLPGTDGIPGQEGPRGEQGSR------------GDAGPPGKRGRKG 741
Fly 742 DRGDKGEQGVPGLDAPCPLGADGLP------------------LPGCGWRPPKEPIISTP 783 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG42342 | NP_001189234.1 | DUF4763 | 130..>210 | CDD:292582 | |
Collagen | 366..413 | CDD:189968 | 23/63 (37%) | ||
Collagen | 660..718 | CDD:189968 | 26/96 (27%) | ||
Collagen | 690..748 | CDD:189968 | 29/108 (27%) | ||
Col9a2 | NP_001102145.1 | Collagen | 258..315 | CDD:189968 | 26/61 (43%) |
Collagen | 321..379 | CDD:189968 | 21/57 (37%) | ||
Collagen | 360..418 | CDD:189968 | 18/57 (32%) | ||
Collagen | 429..486 | CDD:189968 | 26/87 (30%) | ||
Collagen | 459..516 | CDD:189968 | 26/59 (44%) | ||
Blue background indicates that the domain is not in the aligned region. |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
1 | 1.000 |