DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42342 and Col15a1

DIOPT Version :9

Sequence 1:NP_001189234.1 Gene:CG42342 / 7354466 FlyBaseID:FBgn0259244 Length:831 Species:Drosophila melanogaster
Sequence 2:NP_001094005.1 Gene:Col15a1 / 298069 RGDID:1310820 Length:1345 Species:Rattus norvegicus


Alignment Length: Identity:/ - (0%)
Similarity:/ - (0%) Gaps:/ - (0%)


- Green bases have known domain annotations that are detailed below.


Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42342NP_001189234.1 DUF4763 130..>210 CDD:292582
Collagen 366..413 CDD:189968
Collagen 660..718 CDD:189968
Collagen 690..748 CDD:189968
Col15a1NP_001094005.1 TSPN 40..228 CDD:214560
Collagen 616..668 CDD:189968
Collagen 800..890 CDD:189968
Endostatin-like 1172..1338 CDD:238151
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
11.000

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