DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG42232 and Rtn4

DIOPT Version :9

Sequence 1:NP_001138060.1 Gene:CG42232 / 7354465 FlyBaseID:FBgn0250754 Length:3441 Species:Drosophila melanogaster
Sequence 2:NP_918943.1 Gene:Rtn4 / 68585 MGIID:1915835 Length:1162 Species:Mus musculus


Alignment Length:875 Identity:184/875 - (21%)
Similarity:332/875 - (37%) Gaps:228/875 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly  1141 TEPLVFSDDEE--EPKKSEGTTKQSDSAQEPSIAYKLEESV-NLTEHKTVDENSSKYDVETGAIS 1202
            :||::.|..|:  :.|:..|.|..|.....||:.::...|: :|:...||   |.|   |.|.:.
Mouse   179 SEPVIPSSAEKIMDLKEQPGNTVSSGQEDFPSVLFETAASLPSLSPLSTV---SFK---EHGYLG 237

  Fly  1203 EISLIEVEDTTIEASTCEQNLESCKLQEEKSVDIASVNSDENIESAVVELTILE-SEIFPLDTTA 1266
            .:|.:...:.|||.:..|.:.|   |.|.      :.|...|.|||  |.::|| ||:       
Mouse   238 NLSAVASTEGTIEETLNEASRE---LPER------ATNPFVNRESA--EFSVLEYSEM------- 284

  Fly  1267 DSSIN------STNVLDSSVEKTI-----------------PDRN--------LKGGKLQEEKSL 1300
            .||.|      |..:::::.|:.|                 |..:        .:.|.:..||::
Mouse   285 GSSFNGSPKGESAMLVENTKEEVIVRSKDKEDLVCSAALHNPQESPATLTKVVKEDGVMSPEKTM 349

  Fly  1301 DIASVNSDENIESAVELTILE--SEIFPLD---TTVDSSINSTNVL------DSSVEKTIPEHNL 1354
            ||.:     .::.:|...:.|  ::..|.:   ...|:...|.:||      :|.|:|...|.:|
Mouse   350 DIFN-----EMKMSVVAPVREEYADFKPFEQAWEVKDTYEGSRDVLAARANMESKVDKKCFEDSL 409

  Fly  1355 NQ----EDAKATNDAQDTSVTDE--KSST------DLYRSVGE--------VLPSNKSDLHTDEP 1399
            .|    :|:::.|:......|.|  |..:      |.:.|..|        ||..:.|:..|||.
Mouse   410 EQKGHGKDSESRNENASFPRTPELVKDGSRAYITCDSFSSATESTAANIFPVLEDHTSENKTDEK 474

  Fly  1400 PIVISSSKELAKEAKSGDGNPI---DNDNSKPYIERSEELSEETK-----------PDKVSSAAE 1450
            .|....::.:.::......||.   .:|:...|: .::.||:.|:           ||.|..|.|
Mouse   475 KIEERKAQIITEKTSPKTSNPFLVAIHDSEADYV-TTDNLSKVTEAVVATMPEGLTPDLVQEACE 538

  Fly  1451 SDRPVTETSPTPKAPGAESKQPLTESHSDELVKETNSNEVSVDGELIQPAIETLPFVEQKQE--- 1512
            |:  :.|.:.|..|  .|:|..|.:  :.|.::|:           |.|..:..|..|:.:.   
Mouse   539 SE--LNEATGTKIA--YETKVDLVQ--TSEAIQES-----------IYPTAQLCPSFEEAEATPS 586

  Fly  1513 ---PDVSTDAESNQHCIESSPLNEL----SENIQREEVHTL--------DNTKQEVK-PYPVMEV 1561
               ||:..:|          |||.|    ..::.:.....|        |..|.|.: |.|..|.
Mouse   587 PVLPDIVMEA----------PLNSLLPSTGASVAQPSASPLEVPSPVSYDGIKLEPENPPPYEEA 641

  Fly  1562 LK-ETKTDESIQSVTNTYPTEELQEEAKADELPTVSEMVQAFKETKTDDTIKPIIETSPEREPLE 1625
            :. ..||.:|.:.:..   .|.....|:..|.|.:|......||||......|......|....|
Mouse   642 MSVALKTSDSKEEIKE---PESFNAAAQEAEAPYISIACDLIKETKLSTEPSPEFSNYSEIAKFE 703

  Fly  1626 EAHPDELPSSSEKDQVIVETPSAETRPTIETSCDEPLSTAGTDIVPDLSQIDQ---LIFEKSPAE 1687
            ::.||...        :|:..|.|:         ||:.....|.:|::.|..:   ::.::|..|
Mouse   704 KSVPDHCE--------LVDDSSPES---------EPVDLFSDDSIPEVPQTQEEAVMLMKESLTE 751

  Fly  1688 -------EPHEK---AKPDETTQEVIE--------TSHAEKDPIEASPKEDSSVSKMD--NAVVE 1732
                   ..|::   |.|.|..:..:|        |..|..:.|....|:::...:|:  |..:.
Mouse   752 VSETVTQHKHKERLSASPQEVGKPYLESFQPNLHITKDAASNEIPTLTKKETISLQMEEFNTAIY 816

  Fly  1733 TN-----PQTDKLIPPDEITNCGPVDICIDEF----SLRNSS----SAFEIEHSEEVATT---SL 1781
            :|     .:.||:...:..::..|::| ||||    |.::.|    :..|:.:..|:|..   :.
Mouse   817 SNDDLLSSKEDKMKESETFSDSSPIEI-IDEFPTFVSAKDDSPKEYTDLEVSNKSEIANVQSGAN 880

  Fly  1782 DLDLSEISKEKGNMEALPNDNA-----------CVKHIACDLANVSSLEEPTNLSPKTRLRGTSM 1835
            .|..||:..:.......|.|.|           .|..:...|.|||:||....:....:.:..:.
Mouse   881 SLPCSELPCDLSFKNTYPKDEAHVSDEFSKSRSSVSKVPLLLPNVSALESQIEMGNIVKPKVLTK 945

  Fly  1836 SQDEAAQVDEQNENDHVEEHVAMEVSSNEI 1865
            ..:|....|.:.|:..:...::.|::...:
Mouse   946 EAEEKLPSDTEKEDRSLTAVLSAELNKTSV 975

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG42232NP_001138060.1 KAR9 <335..537 CDD:285747
PTZ00121 <2402..2976 CDD:173412
PHA03247 <2935..3317 CDD:223021
PRK12678 3307..>3440 CDD:237171
Rtn4NP_918943.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..183 2/3 (67%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 406..432 6/25 (24%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 711..730 5/35 (14%)
Reticulon 975..1139 CDD:280592 0/1 (0%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
00.000

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