DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and OtopLa

DIOPT Version :10

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001162676.1 Gene:OtopLa / 8674066 FlyBaseID:FBgn0259994 Length:991 Species:Drosophila melanogaster


Alignment Length:957 Identity:251/957 - (26%)
Similarity:382/957 - (39%) Gaps:365/957 - (38%)


- Green bases have known domain annotations that are detailed below.


  Fly   847 QADGQLALMYH---SHQLT-----------------NYPVLPAIKRTHRPSFVYPPMPR------ 885
            |.||     ||   :||.|                 ::|:.....:..:..:.:.|.|.      
  Fly    46 QGDG-----YHTSPAHQRTPLVPHDLGEDFNLDFDDDFPIDARRPKNAKVCYTFKPNPNKYSFMP 105

  Fly   886 -----------------VKAGDALATLFSALYGKLLVVMGIAFPMAEVISTYIPPSFYEVYYLYL 933
                             ::...:|..:.|.:|..||:|:.||:.:::|.:..:|..:||.::.||
  Fly   106 AKITVQGTYETNPITGPIELWTSLFIVTSLVYAILLIVVCIAYVISDVTTHRLPVLYYETFFTYL 170

  Fly   934 YIGSMIFLLFMYATLI-----------WGRPKLPVPIASPSKSATKASGTDSMD-ESDTDSN--- 983
            |..|::|||:::..|:           ..:|| |.|....||.|..|...||.| :...||.   
  Fly   171 YGVSILFLLYVFCFLLQESSCCNGGNGGSKPK-PQPKEKKSKKAKNADPADSKDAKGSKDSGKAA 234

  Fly   984 ---SVHHRLPP--PIPVRRPSLLSPLGRR-------DAHYGSFYLRMGAVAFGIGSMIYSGLEFG 1036
               :..|.|..  ..||.....::|...|       |..:|||:||:||:|||:|:|||.|||||
  Fly   235 KGAAYQHTLAKFLEAPVDAEVAVTPKNVRKRKTTHSDLTHGSFFLRVGAIAFGLGAMIYIGLEFG 299

  Fly  1037 QYFELNPDTKCHNVLLALTPATRMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVW 1101
            .:||:..|:.||::|:.:.|..:|.|.|:||||||: |.::.::|:|:||||||||::.||:.||
  Fly   300 SFFEIPFDSPCHHILIGVNPLLQMIFTFMQMYFIFM-NARLNIHRFKVIARFGLMHVVATNICVW 363

  Fly  1102 LNVLIQETKHEILTFY---NPENRTLRISHRIPGHSRGHA---------------------IIQH 1142
            :..|::|:..||..::   .||.....|:|.|..|:..||                     |:..
  Fly   364 IRTLVKESLLEITIYHQKNEPEAGASSIAHSIRQHALRHAGTVLRTHAGPNSEFEVLDGEDILPK 428

  Fly  1143 D---------------------------------------PTAHLRVP--------------RGL 1154
            |                                       .|...|.|              |.|
  Fly   429 DVYKSDNVLSKLVRNTVDGISKSLGMGGDQALDSSTTSSSTTTTTRAPFTTPNYQWHSTTMARKL 493

  Fly  1155 K---------------------------------------------------------------- 1155
            |                                                                
  Fly   494 KKFITSATTAATTAAGSSSTASSTTTISPTISSTTIPSTTISSTTISSSTTFSPFSPSTTTTTTT 558

  Fly  1156 ----------------------------------------------------------------- 1155
                                                                             
  Fly   559 TAAALNLETSGSESPFGGLQRILSSAAPPSLAPVDGFGSASAATPTSGSGAGSFVDSFLASTLSP 623

  Fly  1156 -----------------GPYQ------------------IFE----------------------- 1162
                             ||.:                  .||                       
  Fly   624 ASSTEGSASIMNNLFGQGPMENSFQTYTDLGHEEATGLVSFENLESLDNIYPAALSSNIGTLNST 688

  Fly  1163 -CRRTNIIGTLVQDASPFLFPCTIEYSLICAAILYVMWRSISRPQTPTPQRPD----------MI 1216
             |.|.:|:||:|.|::|:|:|..||||||.|.:|||||:.|.|    .|.|.:          |:
  Fly   689 ACGRIDIMGTIVYDSAPYLYPFIIEYSLIGAVVLYVMWKHIGR----YPGRMNDEDLEHRLEVML 749

  Fly  1217 SS---PMKRSPHHYSVDCARAHKGLFVGILILVLTIISLIIFFVLISRPEFVAMAV--TEVTICE 1276
            |.   .|.:......|||..:.||||.|:|:||..:|.||:||||:...:|..:|:  .:.:.|.
  Fly   750 SRRAVAMAQQARSGRVDCVGSSKGLFFGLLLLVGALICLILFFVLVRHQQFSLLAIYLADASHCI 814

  Fly  1277 LLIYGTATIATLVGMIQIRHLQYDAYRSFSLDDILLVGAQTGSFLYNIFTVIAGHF-TLRSD-DM 1339
            |:.:  |.:|.:||.|::::|::......:|:||||..:..|.|.|::|::|||.. .|.|: .:
  Fly   815 LMAF--AILAIIVGFIRVKNLKFRCEEQSNLNDILLRISAFGLFTYSVFSIIAGSLKVLESEPSL 877

  Fly  1340 LVPINALASIVQTACQTMFILDASRRQAVSPEHLRKKPGREIVTFMLVVNLAMWAISTLEKSRAE 1404
            ||......::.|...|.:||.|.|||:...|||.|.||||:||||:|:.|:||:||.|.|..:..
  Fly   878 LVTTTGGVAVFQVILQLLFIADVSRRRVHLPEHDRSKPGRQIVTFLLICNVAMFAIYTFEAQKVF 942

  Fly  1405 SHPIQLNFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKLK 1451
            ::|:||.|||...|:||..:::||.||:||||.|.|.||||..||.:
  Fly   943 ANPVQLEFYGFVPWSIIQRITLPLCIFHRFHSAVTLAEIWKTTYKAR 989

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Retinal <442..643 CDD:464722
Otopetrin 1015..1434 CDD:460840 185/700 (26%)
OtopLaNP_001162676.1 Otopetrin 278..>425 CDD:460840 59/147 (40%)
Otopetrin <673..972 CDD:460840 114/304 (38%)
Blue background indicates that the domain is not in the aligned region.

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