DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otop1

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_942098.1 Gene:otop1 / 322893 ZFINID:ZDB-GENE-030131-1613 Length:586 Species:Danio rerio


Alignment Length:715 Identity:138/715 - (19%)
Similarity:264/715 - (36%) Gaps:225/715 - (31%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 GGPDSS-----DPPSSPGGSSSQPALSGSQADGQLALMYHSHQLTNYPVLPAIKRTHRPSFVYPP 882
            ||.||.     :|.::...|||    |.|.|:.:|...........||                 
Zfish     5 GGTDSMWLNKYNPAAASSASSS----SSSDAENKLFSRLKVSLTKKYP----------------- 48

  Fly   883 MPRVKAGDALATLFSALYGKLLVVMGIAFPMAEVISTYIPPSFYEVYYLYLYIGSMIFLLFMYAT 947
                   ...|.|.||.||..|:::|::..:|  ::....|...|....::.:..::.|::|...
Zfish    49 -------QKNAELLSAQYGTNLLLLGVSVMLA--LAAQSGPVKEEHLLSFITVLMLVQLVWMLCY 104

  Fly   948 LIWGRPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLPPPIPVRRPSLLSPLGRRDAHYG 1012
            :|                                              ||....||:..||||.|
Zfish   105 MI----------------------------------------------RRERERSPVPERDAHAG 123

  Fly  1013 SFYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATRMAFIFIQMYFIFLNNEQI 1077
            :.::|.|.....:.|:|......|.:...:   .|.:..|.:.|.........|::|::.:.:.:
Zfish   124 ASWIRGGLTMLALLSLIMDAFRIGYFVGYH---SCISAALGVYPIVHALHTISQVHFLWFHIKDV 185

  Fly  1078 KVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENRTLRISHRIPGHSRGHAIIQH 1142
             :.:|:...|||::|.:.|||.:|.|.::.||:|   ..:|...|.:.:         |:|.:..
Zfish   186 -IKKYETFERFGVIHAVFTNLLLWCNGVMSETEH---FMHNHRRRLIEM---------GYANLST 237

  Fly  1143 -DPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCTIEYSLICAAILYVMWRSISRPQ 1206
             |...|               |..|..:..:...:..:|:|..|||.:..:|:|:|||::|.|..
Zfish   238 VDVQPH---------------CNCTTSVWLMFSTSLYYLYPFNIEYHIFVSAMLFVMWKNIGRTL 287

  Fly  1207 TPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFV----GILILVLTIISLIIFFVLISRPEFVAM 1267
                   |..|:..:||         ....||.:    |::.|..::..|:::.:.:.:.|    
Zfish   288 -------DRHSNRKRRS---------TGSTGLLLGPLGGLVALASSVSVLVVYLIHLEKTE---- 332

  Fly  1268 AVTEVTICELLIYGTATIA---------TLVGMIQIRHLQYDAYRSFSLDDILLVGAQTGSFLYN 1323
            .:.|..:.....||.|.:|         .||..::.|.:...:..:.:||..||:.:..||:|.:
Zfish   333 EMHEAAVSMFYYYGVAMMACMCVGSGTGLLVYRMENRPMDTGSNPARTLDTELLLASSLGSWLMS 397

  Fly  1324 IFTVIAG-----------HFTLRSDDMLVPINALASIVQTACQTMFILDA--------------- 1362
            ..:|:|.           .:|..:..:|:       :::...|.:||:::               
Zfish   398 WCSVVASVAEAGQKSPSFSWTSLTYSLLL-------VLEKCIQNLFIVESLYRRHSEEEEDAAAP 455

  Fly  1363 ------------------------------------SRRQAVSP----EHLRKKPGRE------I 1381
                                                ||:|..:|    :.|...|||:      |
Zfish   456 QVFSVAVPPYDGILNHGYEAHDKHREAEPAAGSHALSRKQPDAPLPAGQRLDVTPGRKRQILKNI 520

  Fly  1382 VTFMLVVNLAMWAISTLEKSRAESHPIQLNFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIWKR 1446
            ..|:.:.|:::|.:..........:|::...:|...||.:.:|::||.:|||.||...|.|::::
Zfish   521 CMFLFMCNISLWILPAFGCRPQYDNPLENETFGTSVWTTVLNVAIPLNLFYRMHSVASLFEVFRK 585

  Fly  1447  1446
            Zfish   586  585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 96/504 (19%)
otop1NP_942098.1 Otopetrin 127..572 CDD:281218 95/502 (19%)
FYR-box 163..167 1/3 (33%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 484..505 4/20 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm6364
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
66.050

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