DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and Otop1

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_852098.1 Gene:Otop1 / 305427 RGDID:631389 Length:600 Species:Rattus norvegicus


Alignment Length:742 Identity:137/742 - (18%)
Similarity:254/742 - (34%) Gaps:259/742 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   815 GDRDIGGGGGPDSSDPPSSPGGSSSQP------ALSGSQADGQLALMYHSHQLTNYPVLPAIKRT 873
            |||.........|..|.::|.|.::.|      |.:..||.|                       
  Rat     3 GDRGALSSPAASSGSPSAAPSGIAACPPPPSPLARASPQASG----------------------- 44

  Fly   874 HRPSFVYPPMPRVKAGDALATLFSALYGKLLVVMGIAFPMA-EVISTYIPPS----------FYE 927
                    |.........||...|:.||..:.|.|:.|.:| .|.:|.:..|          ..:
  Rat    45 --------PRRGASVPQKLAETLSSQYGLNVFVAGLLFLLAWAVHATGVGKSDLLCVLTALMLLQ 101

  Fly   928 VYYLYLYIGSMIFLLFMYATLIWGRPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLPPP 992
            :.::..|:|..    :|...||  |||                                      
  Rat   102 LLWMLWYVGRS----YMQRRLI--RPK-------------------------------------- 122

  Fly   993 IPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPA 1057
                           |.|.|:.:||.....|...:::...|:...:...   ::|.:....:.|.
  Rat   123 ---------------DTHAGARWLRGSITLFAFITIVLGCLKVAYFIGF---SECLSATEGVFPV 169

  Fly  1058 TRMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENR 1122
            |......:|:||::.:.:.| :..:|.:.|||::|.:.|||.:|.|.::.|:||::   ...:.|
  Rat   170 THAVHTLLQVYFLWGHAKDI-IMSFKTLERFGVIHSVFTNLLLWANSVLNESKHQL---NEHKER 230

  Fly  1123 TLRISHRIPGHSRGHAII---QHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDASPFLFPCT 1184
            .:.:..       |:..|   .|.|..:...|                .:.:.:.....:|:|..
  Rat   231 LITLGF-------GNITIVLDDHTPQCNCTPP----------------ALCSALSHGIYYLYPFN 272

  Fly  1185 IEYSLICAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFV----GILIL 1245
            |||.::.:.:|||:|::|.|       |.|        |..|..:.|  ...|:.|    |:.:|
  Rat   273 IEYQILASTMLYVLWKNIGR-------RVD--------SSRHQKMQC--RFDGVLVGSVLGLTVL 320

  Fly  1246 VLTIISLIIFFVLISRPE---------FVAMAVTEVTICELLIYGTA-TIATLVGMIQIRHLQYD 1300
            ..||..::::.:.|.|.:         |...|:|     .||:.|.| .:.:.:..:..:.|...
  Rat   321 AATIAVVVVYMIHIGRSKSKSESALIMFYLYAIT-----VLLLMGAAGLVGSWIYRVDEKSLDES 380

  Fly  1301 AYRSFSLDDILLVGAQTGSFLYNIFTVIA-------GHFTLRSDDMLVPINALASIVQTACQTMF 1358
            ...:..||..|||...:||:|.:..:::|       ..:|..:    :|.:.|. ||:...|.:|
  Rat   381 KNPARKLDADLLVATASGSWLLSWGSILAIACAETRPPYTWYN----LPYSVLV-IVEKYVQNIF 440

  Fly  1359 ILDA------------------------------------SRRQAVSPE-----HLRKKPGRE-- 1380
            |:::                                    ...|..||.     ||:::..:|  
  Rat   441 IIESVHLEPEGVPEDVRTLRVVTVCSGEAAALAASSLGSQGTAQDGSPAVNGNLHLQQRCEKEDQ 505

  Fly  1381 ----------------------------IVTFMLVVNLAMWAISTLEKSRAESHPIQLNFYGLWA 1417
                                        |..|:.:.|:::|............:.::...:|...
  Rat   506 EADWEGATGTTRCLDFLQGGMKRRLLRNITAFLFLCNISLWIPPAFGCRPEYDNGLEEIVFGFEP 570

  Fly  1418 WTIITHVSMPLAIFYRFHSTVCLCEIW 1444
            |.|:.:::||.:||||.|:...|.|::
  Rat   571 WIIVVNLAMPFSIFYRMHAAAALFEVY 597

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 97/513 (19%)
Otop1NP_852098.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..50 13/77 (17%)
Otopetrin 131..586 CDD:281218 96/511 (19%)
putative FYR-box 584..596 5/11 (45%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
76.880

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