DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and Otop3

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:XP_038941598.1 Gene:Otop3 / 287821 RGDID:1306663 Length:578 Species:Rattus norvegicus


Alignment Length:685 Identity:140/685 - (20%)
Similarity:251/685 - (36%) Gaps:182/685 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   825 PDSSDPPSSPGGSSSQPALSGSQADGQLALMYHSHQLTNYPVLPAIK---RTHRPSFVYPPMPRV 886
            |:.:..|||. ..:::.|.:..||:..:...:     |..|..|..|   ..|....:.......
  Rat     8 PEPAPMPSSE-AETTEAASTYDQANMDVETKH-----TGPPGAPKQKSWLALHFSLLLRRDRQAQ 66

  Fly   887 KAGDALATLFSALYGKLLVVMGIAFPMAEVISTYIPPSFYEVYYLYLYIGSMIFLLFMYATLIWG 951
            |||.    |||.|....:|.:|.|| :..:|...:..:..:|:.|...:..:..|..:|.|:   
  Rat    67 KAGQ----LFSGLLALNVVFLGGAF-ICSMIFNKVAVTLGDVWILLAALKVLSLLWLLYYTV--- 123

  Fly   952 RPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLPPPIPVRRPSLLSPLGRRDAHYGSFYL 1016
                               ||                      .|:|..:.   .||.|.|..::
  Rat   124 -------------------GT----------------------TRKPHAVL---YRDPHAGPVWV 144

  Fly  1017 RMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATRMAFIFIQMYFIFLN-NEQIKVY 1080
            |...|.||..::..:....|  :::: ...|.:.:..:.||..:.|:.||.:.::.: .:.::|.
  Rat   145 RGSLVLFGSCTVCLNVFRMG--YDVS-HIHCKSEVELIFPAIEIVFMIIQTWVLWKHCKDCVQVQ 206

  Fly  1081 RYKIIARFGLMHMIGTNLAVWLNVLIQETKHEILTFYNPENRTLRISHRIPGHSRGHAIIQHDPT 1145
            ..  ..|.|||..:.|||.:|:..:..::.|..:     |.....:..:..|:.....:      
  Rat   207 TN--FTRCGLMLTLATNLLMWVLAVTNDSMHREI-----EAELDALMEKFSGNGTNTCM------ 258

  Fly  1146 AHLRVPRGLKGPYQIFECRRTNII-----GTLVQDASPFLFPCTIEYSLICAAILYVMWRSISRP 1205
                             |....:.     |.|:      |:|.:.||.|||.|:|:|||:::.|.
  Rat   259 -----------------CLNATVCEVFRKGFLM------LYPFSTEYCLICCAVLFVMWKNVGRS 300

  Fly  1206 ----QTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLF---VGILILVLTIISLIIFFVLISRPE 1263
                ....|.||..                 |.|..:|   :|:|.||..:...::|.:..|.|:
  Rat   301 LAAHSGAHPNRPPF-----------------RLHGAIFGPLLGLLALVAGVCVFVLFQIEASGPD 348

  Fly  1264 FVAMAVTEVTICELLIYGTATIATLVGM----IQIRHLQYDAYRSFSLDDILLVGAQTGSFLYNI 1324
            ......|......:.:..|.::|.|.|.    ::.|.|......:.|||.:||:||..|......
  Rat   349 IARQYFTLYYAFYVAVLPTMSLACLAGTAIHGLEERELDTLKNPTRSLDVVLLMGAALGQMGIAY 413

  Fly  1325 FTVIA-----GHFTLRSDDMLVPINALASIVQTACQTMFILD----------------------- 1361
            |:::|     .|..|   :.|:...:|..|:|...|.:||::                       
  Rat   414 FSIVAIVATQPHQLL---NQLILAYSLLLILQHITQNLFIIEGLHRRPLWEPVISGVPEKQDIEL 475

  Fly  1362 ---------------ASRRQAVSPEHL--RKKPGREIVTFMLVVNLAMWAISTLEKSRAESHPIQ 1409
                           |||....|..||  :::..:||..|:::.|:.:|.:..........:.::
  Rat   476 PRRGSLRELGQDLRRASRAYIHSFSHLNWKRRMLKEISLFLILCNITLWMMPAFGIHPEFENGLE 540

  Fly  1410 LNFYGLWAWTIITHVSMPLAIFYRFHSTVCLCEIW 1444
            .:|||...|..|.:..:||.:|||.||...|.|::
  Rat   541 KDFYGYRTWFTIVNFGLPLGVFYRMHSVGGLVEVY 575

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 98/480 (20%)
Otop3XP_038941598.1 Otopetrin 149..564 CDD:397346 96/473 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm9002
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
55.020

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