DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and Otop2

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_001349329.1 Gene:Otop2 / 237987 MGIID:2388365 Length:563 Species:Mus musculus


Alignment Length:532 Identity:122/532 - (22%)
Similarity:213/532 - (40%) Gaps:132/532 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly   988 RLPPPIPVRRPSLLSPLGRRDAHYGSFYLRMGAVAFGIGSMIYSGLEFGQY---FELNPDTKCHN 1049
            |.|..:|.           ||||.|..:||.|.|.|||.:::....:.|.|   ||      |.:
Mouse    86 RCPDAVPY-----------RDAHAGPIWLRGGLVLFGICTLVMDVFKTGYYSSFFE------CQS 133

  Fly  1050 VLLALTPATRMAFIFIQMYFIFLNNEQIKVYRYKIIARFGLMHMIGTNLAVWLNVLIQETKHEIL 1114
            .:..|.|..:..|:.:|.||::::.:.. ::.:..:.|.|||..:.||||:|:..::.|:.|:..
Mouse   134 AIKILHPIIQAVFVIVQTYFLWISAKDC-IHTHLDLTRCGLMFTLATNLAIWMAAVVDESVHQAH 197

  Fly  1115 TFYNPENRTLRISH-RI-PGHSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQDAS 1177
            ::......|   || |: |...|.....:.||                  |..:..|..:.|...
Mouse   198 SYSGSHGNT---SHTRLNPDSKRAGGAAEEDP------------------CLCSTAICQIFQQGY 241

  Fly  1178 PFLFPCTIEYSLICAAILYVMWRSISR------PQTPTPQRPDMISSPMKRSPHHYSVDCARAHK 1236
            .:|:|..|||||..:.:|||||:::.|      ....||.|..:........|            
Mouse   242 FYLYPFNIEYSLFASTMLYVMWKNVGRLLASTHGHGHTPSRVSLFRETFFAGP------------ 294

  Fly  1237 GLFVGILILVLTIISLIIFFVLISRPE-FVAMAVTEVTICELLIYGTATIATLVGMI----QIRH 1296
              .:|:|:.|:.:...|::.|.:|... ....|:.......::..|..|:.:|.|.:    ..|.
Mouse   295 --VLGLLLFVVGLAVFILYEVQVSGERGHTRQALVIYYSFNIVCLGLMTLVSLSGSVIYRFDRRA 357

  Fly  1297 LQYDAYRSFSLDDILLVGAQTGSF---LYNIFTVIAGHFTLRSDDMLVPIN---ALASIVQTACQ 1355
            :.:....:.:||..||:||..|.:   .|:|..|:.|    ...|:...:|   ||..|.|...|
Mouse   358 MDHHKNPTRTLDVALLMGAALGQYAISYYSIVAVVVG----SPRDLQGALNLSHALLMIAQHTFQ 418

  Fly  1356 TMFILDASRR----------------QAV--------------------------SPE------- 1371
            .:||:::..|                |.:                          ||:       
Mouse   419 NVFIIESLHRGPPGAEPREMPPKEPCQGITFANLDAIRTLPSCPPTPRLVIPNLESPQEAVAIIS 483

  Fly  1372 ----HLRKKPGREIVTFMLVVNLAMWAISTLEKSRAESHPIQLNFYGLWAWTIITHVSMPLAIFY 1432
                |.|::..::|..|:|:.|:.:|.:.........|:.::::|||...|..|.::.:|..|||
Mouse   484 APRCHWRRRCLKDISLFLLLCNVILWIMPAFGARPHFSNTVEVDFYGYSLWAAIVNICLPFGIFY 548

  Fly  1433 RFHSTVCLCEIW 1444
            |.|:...|.|::
Mouse   549 RMHAVSSLLEVY 560

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 110/493 (22%)
Otop2NP_001349329.1 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..20
Otopetrin 103..549 CDD:397346 109/491 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H27803
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 1 1.000 - - mtm8758
orthoMCL 1 0.900 - - OOG6_105319
Panther 1 1.100 - - LDO PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 1 0.960 - -
109.810

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