DRSC/TRiP Functional Genomics Resources

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Protein Alignment OtopLc and otpl-8

DIOPT Version :9

Sequence 1:NP_001303575.1 Gene:OtopLc / 7354434 FlyBaseID:FBgn0259150 Length:1596 Species:Drosophila melanogaster
Sequence 2:NP_510045.2 Gene:otpl-8 / 186752 WormBaseID:WBGene00010403 Length:619 Species:Caenorhabditis elegans


Alignment Length:687 Identity:177/687 - (25%)
Similarity:280/687 - (40%) Gaps:193/687 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly   823 GGPDSSDPPSSPGGSSSQPALSGSQADGQLALMYHSHQLTNYPVLPAIKRTHRPSFVYPPMPRVK 887
            ||.||...||||                     .|.|:|...|.:      |.|          :
 Worm    32 GGSDSDSLPSSP---------------------THHHELYRRPWI------HEP----------R 59

  Fly   888 AGDALATLFSALYGKLLVVMGIAFPMAEVISTYIPPSFY--EVYYLYLYIGSMIFLLFMYATLIW 950
            |.:....|.::||..:|.::.:   :.||..|:....:.  .::|:.:|...::|..:.|..:|:
 Worm    60 ATNFFVRLITSLYALILTIISL---VVEVSPTWRTDMWLAETIFYISMYGVGILFFAYCYIFIIY 121

  Fly   951 GRPKLPVPIASPSKSATKASGTDSMDESDTDSNSVHHRLPPPIPVRRPSLLSPLGRRDAHYGSFY 1015
            ..|...:..........|.|....:.:|..:....                          |:.|
 Worm   122 PGPYNQLISVLRKYKIIKNSEVWFIMQSQHNGEGA--------------------------GTLY 160

  Fly  1016 LRMGAVAFGIGSMIYSGLEFGQYFELNPDTKCHNVLLALTPATRMAFIFIQMYFIFLNNEQIKVY 1080
            ||:||:.||...::..|||.   |....:..|..|.:| .....:.|.||||:|||.|: :|.|.
 Worm   161 LRLGALFFGSVGIVLFGLEL---FLCIENVACKKVAIA-KMIVAIVFTFIQMHFIFCNS-KITVN 220

  Fly  1081 RYKIIARFGLMHMIGTNLAVWLNVLI--QETK--------------------------HEIL--- 1114
            ..:.|..||:||:|..||..|...::  ||.|                          ||::   
 Worm   221 SSRKIVAFGMMHLISVNLWTWFRFVLAKQEAKAHKKAQLKQTFRKYYSSSSSSSSEEIHELISAV 285

  Fly  1115 ---TFYN-PENRTLRISHRIPGHSRGHAIIQHDPTAHLRVPRGLKGPYQIFECRRTNIIGTLVQD 1175
               |..| |..:|:.     |..||..| ::|                              ..|
 Worm   286 LNSTLNNTPATKTME-----PVASRLFA-LEH------------------------------FGD 314

  Fly  1176 ASPFLFPCTIEYSLICAAILYVMWRSISRPQTPTPQRPDMISSPMKRSPHHYSVDCARAHKGLFV 1240
            .:.||..|.:|||||.|||::::|:||.       |.....|:..||.. ...:||:.:..|||.
 Worm   315 VATFLTTCIVEYSLIGAAIMFILWKSIG-------QNNHQQSNSGKRKV-KMRIDCSSSSTGLFA 371

  Fly  1241 GILILVLTIISLIIFFVLIS-RPEFVAMAVTEVTICELLIYGTATIATLVGMIQIRHLQYDAY-R 1303
            ||:.|:.:::|:.::.:..| |....|..|  ..|.:|.::..|..|.::|:.::|||||..: .
 Worm   372 GIIFLIGSLVSMGMYTIFESLRNSSGAQLV--FGIVDLSLFSIALGACIIGLWRMRHLQYRLHAH 434

  Fly  1304 SFSLDDILLVGAQTGSFLY-----NIFTVIAGHFTLRSDDMLVPINALAS------IVQTACQTM 1357
            ...:|:|||:....|..||     ::|....     ||.|:.|  :||.:      ::|...|..
 Worm   435 GEVIDEILLIIGLIGEILYCAVGIDVFITCR-----RSADLTV--SALPAFVFVIRMIQVVVQAA 492

  Fly  1358 FILDASRRQAVSPEHLRKKPGREIVTFMLVVNLAMWAISTLE--------KSRAESHPIQLNFYG 1414
            |||..||.:.:|...::.|||:||:||:||.|:.::...|.|        .|:|.:   |.|:  
 Worm   493 FILTTSRLRCLSKYSMKYKPGKEIITFLLVSNVTLFVFHTFEGMKSSFGFSSKAAT---QYNY-- 552

  Fly  1415 LWAWTIITHVSMPLAIFYRFHSTVCLCEIWKRAYKLK 1451
                  |.:...||.:||||||:.||.||||..|..|
 Worm   553 ------IIYAVGPLLVFYRFHSSACLAEIWKHTYSTK 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
OtopLcNP_001303575.1 Otopetrin 1015..1434 CDD:281218 133/474 (28%)
otpl-8NP_510045.2 Otopetrin 160..566 CDD:281218 133/474 (28%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 1 1.000 175 1.000 Domainoid score I2171
eggNOG 1 0.900 - - E1_KOG4740
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D243107at33208
OrthoFinder 1 1.000 - - FOG0001932
OrthoInspector 1 1.000 - - mtm4740
orthoMCL 1 0.900 - - OOG6_105319
Panther 1 1.100 - - O PTHR21522
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R3542
SonicParanoid 1 1.000 - - X278
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1211.810

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